Sugiyamaella lignohabitans: AWJ20_800
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Entry
AWJ20_800 CDS
T05270
Symbol
RIM20
Name
(RefSeq) Rim20p
KO
K12200
programmed cell death 6-interacting protein
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03250
Viral life cycle - HIV-1
slb03272
Virion - Hepatitis viruses
slb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AWJ20_800 (RIM20)
03272 Virion - Hepatitis viruses
AWJ20_800 (RIM20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AWJ20_800 (RIM20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_800 (RIM20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slb04147
]
AWJ20_800 (RIM20)
Membrane trafficking [BR:
slb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
AWJ20_800 (RIM20)
Exosome [BR:
slb04147
]
Exosomal proteins
Proteins found in most exosomes
AWJ20_800 (RIM20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
30037873
NCBI-ProteinID:
XP_018735021
UniProt:
A0A167D6K9
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Position
A:complement(2515560..2517113)
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AA seq
517 aa
AA seq
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MTKFPSDIRLDFVWYSTLGYATNAANSYRSLQFERINVLYNIGAVYSRLGCKVPKTSHQD
GLKHAYQYFQFAAGAFKYLINDVLPQFENAPPLALDNNTLESLLYLNLAQAQECFWLKAV
NDGLKNIIIAKLASEVSELYAASLSYSNRSSILRTEWVEHIAFKKDHFNAAAQYRASMDC
LDRGKYGEEVARLRVAVNSSASALKRKRYISPSVLADLQGLHTKAKSDLVRAEKDNDLIY
LQDVVNDRDLPSIGRSSVSKPILPPGLADLPDPVPFASLLPHILYQTARAFQEKIEAYVQ
RHIVTEVESLNSKLHAEFQRLNLPGALDAVEKPLGVPQTLISYAEEIRSNGGLPRLEEAF
QDIARISGECQRLIKEATDTLTVEESEDNTLRAEFGTKRWSRPTSKEAAPHIWKQLDAFK
ENLDIAAKIDEESTSKLTAVGSLLTVLSRGQPALEQFLPHATVVKLSPILEQAMGDLRAA
ISKCRGTELDRSQYLKVLQAEVNKVDLRKLYQKTLII
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtttccaagtgacatcaggttggatttcgtgtggtatagtaccctaggctat
gctacaaatgcagccaattcgtataggtctcttcaatttgagcgaatcaatgttctgtat
aatattggtgctgtgtactcccgtctgggatgtaaggtgcccaagacatcgcaccaagat
ggacttaaacatgcttaccagtactttcaatttgctgcgggtgcttttaaatatctcata
aacgatgtccttcctcaatttgaaaatgctccaccactagcccttgacaataacactctt
gaatcgctactgtatttgaacttggcacaagcacaagaatgcttttggctgaaagctgtc
aacgacgggctcaagaatataattatagctaaactagcaagtgaggtctctgaactgtat
gctgcatccctatcttattcgaatcgcagttctatattacgaactgaatgggtagaacat
attgcatttaaaaaggatcatttcaatgccgcagcacagtatcgtgcctcaatggactgt
ttagatcgaggaaaatatggagaagaagtagccaggttgagggtcgctgtaaatagcagc
gcatctgcactgaaaagaaagagatacatttcccctagtgtgttggcggatttacaagga
ctccacacaaaggccaagtcagaccttgtgagagctgaaaaggataatgatctcatatat
ttacaggacgtggtaaatgatagggacttgccttctattggacgttcgtctgtgtcaaaa
cccattttaccacctggactagcagacttgcccgaccctgtcccttttgcatcgctattg
ccacatattttataccaaacagctagggcattccaagaaaaaatcgaagcttatgttcaa
cgacacattgttacagaagtggagtcactcaatagtaaattgcatgctgaattccagaga
ctaaatctccccggggcattggatgctgtagaaaagccccttggtgtgccacagacactt
attagctatgctgaagaaattagatccaatggaggtttacctagattggaggaagcattc
caggatatagcgaggatatctggagaatgtcaaagactgattaaagaagctactgataca
ctgacggtagaggaatcagaagacaatactctgagagctgaatttggtactaaacgctgg
tcacgaccaacatctaaagaagcggcacctcacatttggaagcagcttgatgcattcaag
gaaaacctcgacattgccgccaagatcgatgaagaatctacgtcgaagctgaccgccgtt
ggatctttactgactgttctttctcgtggccaaccggctctagagcaattcttaccacat
gcgacagttgtaaagctcagtccaatacttgaacaggccatgggggatttacgtgctgcc
atttccaaatgccgtggaactgaactcgatcgctcacagtatctcaaagtgcttcaagcg
gaagtaaacaaagttgatcttcgtaagttatatcagaaaacactgataatttga
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