KEGG   Sugiyamaella lignohabitans: AWJ20_851
Entry
AWJ20_851         CDS       T05270                                 
Symbol
VAM6
Name
(RefSeq) Vam6p
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb04138  Autophagy - yeast
slb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:slb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    AWJ20_851 (VAM6)
   04148 Efferocytosis
    AWJ20_851 (VAM6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slb04131]
    AWJ20_851 (VAM6)
Membrane trafficking [BR:slb04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    AWJ20_851 (VAM6)
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C Clathrin TPR_17 CTLH TseH
Other DBs
NCBI-GeneID: 30037929
NCBI-ProteinID: XP_018735070
UniProt: A0A167D816
LinkDB
Position
A:2685788..2688640
AA seq 950 aa
MISAFSALPIVSLPLTDRSRITSIFAIGGRLLIGYSTGVLQVYNILEPFSPSLQASLSAT
YKNISTQAIEKIGAIQDAGFLVILANSMVSVYDFETYSLDEHLSKTKGATTFATIQGLKE
LDSDQPGVPITLSRLVVACKRKLVCYEWRDTEFIEYKEIQLQETIKSLCFADIDNIICGL
SSEFSVVNLVANSIATVVPDGGDNAPSAVSVGMSYIGIGSRMAPPLCVALDNRLASTFGS
DNKFGMKEIQERKGSSAYLPDYVGSPLITRKSLLVRDTRSTCIDSAGKVVSDYPNIQWPS
APRVLAFSYPYLLDVLQNAVEVRNPATTTVLQSIPIENIDLMTEGKLLYMASARRVYRLL
AGDYNLQIQKLTDNGDLVEAISLLSQIETVLVKDKENKLRHLQILRAQELFKDNKFEEAL
LMFSDISAPPNIVINLYPDNFVAEDENSTIKSTTTDSTKQHNISSASNTSDGEPSNLSTQ
FKWTQRNLTKAVRSLLPYLADTRRKISKLETSQERVKYHGFELSEEIYGDLTVAAGLVDT
TLFKCYMLISPSLVGPLVRVANHCDPVVVEQKLSEVGKWKDLIDFYFGKKMHREALKLLA
KLSGDDNTDSNLLSGPEPTVQYLQRLNNEYLDVIFEFASWPISVDKQFGRDIFLEDSSES
LSLSRPKVFKYLLALPSHDLCIEYLEYLVSELGETLPLFHNNLATLYIRRIEGGREDDIP
KLMTFLSTSSYYKVDRILNEIDENNSKFHEARAILYGKLGQHLEALQLYALEINDQIKAR
KYCADVYEADKNQGQNCSHMLFELYLKDTSQNRQNILDLLSSQGPRMSPIKVLSRLPADF
SLSELDHFLQSQLRTLTSEATSERVDASLSRVHLIRTQEQLLELTQKSTTITNHRTCKLC
KKRLGHSVISIFPNGVVVHFGCQKAYQDMLRQESEKSAPLSLSAYKKSTK
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgatatcggcattttcggctctgccgatagtgtccttgccgttaacagataggtcaagg
ataaccagcatttttgcgataggtggaaggttattgatcggatattcaaccggcgtatta
caggtttataacatattggagccattctcaccatctttacaggcttctttaagtgcaact
tataagaacatatcaacccaagctattgaaaagattggggccatccaagatgctggtttt
ttggtaatcttagccaactctatggtcagtgtgtatgattttgaaacttattcgctggat
gagcatctttcaaaaaccaaaggagcaacaacctttgctacaattcaaggactaaaggag
ttggattccgaccaaccaggggtaccaataacactttcccgtttggtagtagcatgtaaa
agaaaattggtttgttatgagtggagggatacagaatttatcgaatataaagagatacaa
cttcaagagactatcaagagtctgtgctttgctgatatcgataatattatatgtgggtta
tcgtctgaatttagtgtggttaacttagtagcaaatagcattgccactgtggttccagat
ggcggtgacaatgcaccgtctgcggtgtcggttgggatgagttatattggaattggatca
cgaatggctcccccactgtgcgtggccctcgacaataggttagccagcacatttggttca
gacaataagtttggtatgaaagagattcaagagaggaagggttcttcggcatatctaccc
gattatgtaggttcaccactgattactcggaaaagtctattagttcgcgacacacggtcg
acctgtatcgatagcgcaggtaaggtggtctcagattatcctaacattcaatggccatcg
gctccaagagtacttgcattcagctatccctacttgctggatgtattgcaaaatgcggtg
gaagtgaggaatccagccaccactacagtcctccagtccatacccatcgagaatatagac
ttgatgacggagggaaagttgttatacatggcgtcagctagacgggtatatagacttctg
gctggtgactacaatcttcagattcagaagctgactgataatggagatttggttgaggcg
atttctttacttagtcagatagaaactgttcttgttaaagataaagaaaacaaacttcgc
caccttcaaatccttcgtgctcaagagctattcaaggataacaaatttgaagaggctttg
ctcatgttctctgatatttctgcgccccccaatattgttattaatttataccccgacaat
tttgttgcagaagatgagaattcgacaatcaagagtacgacaactgattctactaaacag
cacaatatatcatcagcaagtaatacttcagatggagaaccttctaatctatcgactcaa
tttaagtggacccaaagaaaccttaccaaagctgttcgcagtttattgccgtatttggca
gacacaagaagaaaaatatccaagcttgaaacgtctcaggaaagagttaaatatcatggt
tttgagctttctgaagagatctatggtgatttgactgttgctgctggactggttgacaca
actttgttcaagtgttacatgcttataagcccttccttagtgggcccattagtacgggtc
gccaatcactgcgatcccgttgtggtagaacaaaagttgtctgaagtcggaaaatggaaa
gatttgattgatttttattttgggaagaagatgcatagggaagcgctcaagcttctagca
aaactttccggagacgataatactgattctaatttattgtctggaccagaaccaactgta
caatatcttcaaagattgaacaatgaatatcttgatgtcatatttgaattcgcttcttgg
cccatttcagtcgacaagcaatttggacgggatatatttttggaggactcgtcggaatct
ctttctctttcacggcccaaagtattcaaatatctactagcattaccgtctcatgatctc
tgtattgagtatttggaatacttggttagtgaattgggtgagactctacctctgtttcat
aacaacctagccactctttatattagacgtatagagggtggtcgggaagatgatattccc
aaactgatgacatttttgtcaacatcttcctattacaaggttgacagaatactgaacgag
attgatgagaataattcaaagtttcatgaagctcgtgcaatactatatggcaagctgggg
caacacttagaggcccttcaattatatgcactcgaaattaatgaccagataaaagccagg
aaatattgcgcggatgtctatgaagcagacaaaaaccagggccagaattgttcgcatatg
ttatttgaactgtatttaaaagatacgagtcagaataggcagaacatactagatttgtta
tcatctcaaggaccgcgaatgtcccctatcaaggttttatcccggctccctgccgacttc
agcttgagtgaattagaccatttcttgcaatcccagttgagaacactgacgagtgaagcg
acatctgaaagagttgatgcttctttatcaagggtacacttgatccgaactcaagaacaa
ttattggagttgacccaaaaaagtactactatcaccaatcatcgaacttgtaaattgtgt
aagaaacgtctgggacacagcgttatatcgatattcccgaacggcgtagttgttcatttt
ggttgtcaaaaagcatatcaggacatgctacgacaagagagtgaaaaatccgccccacta
agtcttagtgcttataaaaagtctactaaatag

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