Sugiyamaella lignohabitans: AWJ20_851
Help
Entry
AWJ20_851 CDS
T05270
Symbol
VAM6
Name
(RefSeq) Vam6p
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb04138
Autophagy - yeast
slb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
AWJ20_851 (VAM6)
04148 Efferocytosis
AWJ20_851 (VAM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slb04131
]
AWJ20_851 (VAM6)
Membrane trafficking [BR:
slb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
AWJ20_851 (VAM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_17
CTLH
TseH
Motif
Other DBs
NCBI-GeneID:
30037929
NCBI-ProteinID:
XP_018735070
UniProt:
A0A167D816
LinkDB
All DBs
Position
A:2685788..2688640
Genome browser
AA seq
950 aa
AA seq
DB search
MISAFSALPIVSLPLTDRSRITSIFAIGGRLLIGYSTGVLQVYNILEPFSPSLQASLSAT
YKNISTQAIEKIGAIQDAGFLVILANSMVSVYDFETYSLDEHLSKTKGATTFATIQGLKE
LDSDQPGVPITLSRLVVACKRKLVCYEWRDTEFIEYKEIQLQETIKSLCFADIDNIICGL
SSEFSVVNLVANSIATVVPDGGDNAPSAVSVGMSYIGIGSRMAPPLCVALDNRLASTFGS
DNKFGMKEIQERKGSSAYLPDYVGSPLITRKSLLVRDTRSTCIDSAGKVVSDYPNIQWPS
APRVLAFSYPYLLDVLQNAVEVRNPATTTVLQSIPIENIDLMTEGKLLYMASARRVYRLL
AGDYNLQIQKLTDNGDLVEAISLLSQIETVLVKDKENKLRHLQILRAQELFKDNKFEEAL
LMFSDISAPPNIVINLYPDNFVAEDENSTIKSTTTDSTKQHNISSASNTSDGEPSNLSTQ
FKWTQRNLTKAVRSLLPYLADTRRKISKLETSQERVKYHGFELSEEIYGDLTVAAGLVDT
TLFKCYMLISPSLVGPLVRVANHCDPVVVEQKLSEVGKWKDLIDFYFGKKMHREALKLLA
KLSGDDNTDSNLLSGPEPTVQYLQRLNNEYLDVIFEFASWPISVDKQFGRDIFLEDSSES
LSLSRPKVFKYLLALPSHDLCIEYLEYLVSELGETLPLFHNNLATLYIRRIEGGREDDIP
KLMTFLSTSSYYKVDRILNEIDENNSKFHEARAILYGKLGQHLEALQLYALEINDQIKAR
KYCADVYEADKNQGQNCSHMLFELYLKDTSQNRQNILDLLSSQGPRMSPIKVLSRLPADF
SLSELDHFLQSQLRTLTSEATSERVDASLSRVHLIRTQEQLLELTQKSTTITNHRTCKLC
KKRLGHSVISIFPNGVVVHFGCQKAYQDMLRQESEKSAPLSLSAYKKSTK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatatcggcattttcggctctgccgatagtgtccttgccgttaacagataggtcaagg
ataaccagcatttttgcgataggtggaaggttattgatcggatattcaaccggcgtatta
caggtttataacatattggagccattctcaccatctttacaggcttctttaagtgcaact
tataagaacatatcaacccaagctattgaaaagattggggccatccaagatgctggtttt
ttggtaatcttagccaactctatggtcagtgtgtatgattttgaaacttattcgctggat
gagcatctttcaaaaaccaaaggagcaacaacctttgctacaattcaaggactaaaggag
ttggattccgaccaaccaggggtaccaataacactttcccgtttggtagtagcatgtaaa
agaaaattggtttgttatgagtggagggatacagaatttatcgaatataaagagatacaa
cttcaagagactatcaagagtctgtgctttgctgatatcgataatattatatgtgggtta
tcgtctgaatttagtgtggttaacttagtagcaaatagcattgccactgtggttccagat
ggcggtgacaatgcaccgtctgcggtgtcggttgggatgagttatattggaattggatca
cgaatggctcccccactgtgcgtggccctcgacaataggttagccagcacatttggttca
gacaataagtttggtatgaaagagattcaagagaggaagggttcttcggcatatctaccc
gattatgtaggttcaccactgattactcggaaaagtctattagttcgcgacacacggtcg
acctgtatcgatagcgcaggtaaggtggtctcagattatcctaacattcaatggccatcg
gctccaagagtacttgcattcagctatccctacttgctggatgtattgcaaaatgcggtg
gaagtgaggaatccagccaccactacagtcctccagtccatacccatcgagaatatagac
ttgatgacggagggaaagttgttatacatggcgtcagctagacgggtatatagacttctg
gctggtgactacaatcttcagattcagaagctgactgataatggagatttggttgaggcg
atttctttacttagtcagatagaaactgttcttgttaaagataaagaaaacaaacttcgc
caccttcaaatccttcgtgctcaagagctattcaaggataacaaatttgaagaggctttg
ctcatgttctctgatatttctgcgccccccaatattgttattaatttataccccgacaat
tttgttgcagaagatgagaattcgacaatcaagagtacgacaactgattctactaaacag
cacaatatatcatcagcaagtaatacttcagatggagaaccttctaatctatcgactcaa
tttaagtggacccaaagaaaccttaccaaagctgttcgcagtttattgccgtatttggca
gacacaagaagaaaaatatccaagcttgaaacgtctcaggaaagagttaaatatcatggt
tttgagctttctgaagagatctatggtgatttgactgttgctgctggactggttgacaca
actttgttcaagtgttacatgcttataagcccttccttagtgggcccattagtacgggtc
gccaatcactgcgatcccgttgtggtagaacaaaagttgtctgaagtcggaaaatggaaa
gatttgattgatttttattttgggaagaagatgcatagggaagcgctcaagcttctagca
aaactttccggagacgataatactgattctaatttattgtctggaccagaaccaactgta
caatatcttcaaagattgaacaatgaatatcttgatgtcatatttgaattcgcttcttgg
cccatttcagtcgacaagcaatttggacgggatatatttttggaggactcgtcggaatct
ctttctctttcacggcccaaagtattcaaatatctactagcattaccgtctcatgatctc
tgtattgagtatttggaatacttggttagtgaattgggtgagactctacctctgtttcat
aacaacctagccactctttatattagacgtatagagggtggtcgggaagatgatattccc
aaactgatgacatttttgtcaacatcttcctattacaaggttgacagaatactgaacgag
attgatgagaataattcaaagtttcatgaagctcgtgcaatactatatggcaagctgggg
caacacttagaggcccttcaattatatgcactcgaaattaatgaccagataaaagccagg
aaatattgcgcggatgtctatgaagcagacaaaaaccagggccagaattgttcgcatatg
ttatttgaactgtatttaaaagatacgagtcagaataggcagaacatactagatttgtta
tcatctcaaggaccgcgaatgtcccctatcaaggttttatcccggctccctgccgacttc
agcttgagtgaattagaccatttcttgcaatcccagttgagaacactgacgagtgaagcg
acatctgaaagagttgatgcttctttatcaagggtacacttgatccgaactcaagaacaa
ttattggagttgacccaaaaaagtactactatcaccaatcatcgaacttgtaaattgtgt
aagaaacgtctgggacacagcgttatatcgatattcccgaacggcgtagttgttcatttt
ggttgtcaaaaagcatatcaggacatgctacgacaagagagtgaaaaatccgccccacta
agtcttagtgcttataaaaagtctactaaatag
DBGET
integrated database retrieval system