Sugiyamaella lignohabitans: AWJ20_852
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Entry
AWJ20_852 CDS
T05270
Symbol
UTP21
Name
(RefSeq) Utp21p
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWJ20_852 (UTP21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_852 (UTP21)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AWJ20_852 (UTP21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
ANAPC4_WD40
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_like
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
KNTC1_N
Beta-prop_TEP1_C
Utp12
Beta-prop_DCAF4
TAF1C_beta-prop
Beta-prop_IFT122_1st
Cytochrom_D1
Omptin
Motif
Other DBs
NCBI-GeneID:
30037930
NCBI-ProteinID:
XP_018735071
UniProt:
A0A167D827
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Position
A:complement(2688701..2691466)
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AA seq
921 aa
AA seq
DB search
MPSVAVESTDAKRRKISSSTPVKAISSRVFSPFRTIGLVTDGTPLAITSLGQSFLVTTVV
DNSFQIYDASNLHLLFVSQPRTPSKITCIHSHFHYVYASWERSVGIYKRGNLQSTIVLPD
DHDASEINSILLFGGYLCVSTSETLYVYKSDVKSPANVEFYTSFRVPKVLGQIKHLSHPP
TYLNKVVIAAKSSVLVFNVRSGKLLYTSEDFGSSITAVEPSPVLDIVGISTAAGDIHLYN
IRRGKIVFSLDIGEHVSSISFRTDGTPHLAVGTASGHLFFYDLNGKRRIHSVRGAHSEAS
GGVSKVQYLNGQSIVITNGADNIIQELVFDPSITSSVGSERSITSPPRVLRSRGGHARPP
TSISFTDEEAHFILSASQDKSLWSFSLRKDSQSHEFSQRTSATTNGKRNAGLAGSGLREK
FSEITDLAYQANKQNRWDNIITAHKNLDYARTWSGSRGIVGKYNLHTLDGGIVKSVGISQ
CGNFGLIGSSQGSIAVYNLQSGTLRRKIVTTSHKKAVTGIASDSFNKVIISCSLEGFVMF
HDFHNASRIGKINLESSALQMRFHSRSNLLAVALDNLSVVVIDIQTRRVIRELWGHTNAI
TSFDFTPDGRWIISASLDSSIRTWDIPSGGCIDAVKVNNIVTCLKVSPNGEWLATSHVQG
AGVQLWTMKSQFQKISTRTISEDEVNDIVMPNSTGEGGSNIIEGAFELAQDETDMDQSDW
NSPNTLSDKLQTLSLLPKTKLNTLVHLDLIKLRNKPKEAPKVPEKSPFFLGVPGVESERQ
ETSEGPFNQPKMKNTISSESTFTRLLRSGDVEGFLTHLKGLSPSATDLEIRSLNTFPPLN
EFISFIDALTYQLQQKRDYELVQAWMTMLLRIHGDIILANQKDSDLIASLSSFETEQDSE
SVRLDKLTKYCSGVLNYLRTA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgtagcggttgaatctaccgacgctaagagaagaaagatttcttcctcgact
cctgtcaaggccatttcatcaagggtcttttctccgttccgtactatcggtcttgtcaca
gatggaacaccgcttgcgataacatctcttggacaatcattcctagtaacaactgtagtc
gataattcctttcaaatttatgatgcttcgaacctccacctcctgttcgtgtctcaacca
agaacaccaagtaagataacttgtatccactcgcatttccactatgtttatgcatcttgg
gaacgaagtgttggtatctacaaaagaggtaatctccaatctactatcgtcctaccagat
gaccacgatgctagcgaaattaatagcattcttctatttggtgggtacttgtgtgtttcg
actagtgagaccctgtatgtttacaaaagtgatgtaaagtcacctgcaaatgtcgagttc
tacacctctttcagggttcctaaagttcttggccaaattaagcacctctcacaccctcct
acttatctcaacaaagtagttattgcagcaaagtcttcagtcttggtgttcaacgtcaga
tctggaaaactcctctatacttctgaagattttggttcgtctattaccgctgttgaacct
tctccagttttagatatcgttggtatttctactgctgctggtgatattcatctgtataac
attcgcagaggcaaaattgttttttcactagacataggtgagcatgtttcatctatttct
ttccgtactgatggcacaccacatcttgctgtaggtaccgcttctggtcatttgttcttt
tatgatttgaatgggaaacgacgtatacattcagttagaggtgcccacagtgaggcttct
ggtggtgtctctaaggtacaatatcttaatggacaatcgattgttattaccaatggtgca
gacaatattatccaagagcttgttttcgatccttcaataacatcttcggtaggaagtgaa
cgaagtataacctcgccaccacgtgttctgagatctcgaggtggccatgcgagaccaccc
acaagtatttcttttactgatgaagaagcccattttattctctcggcatctcaagataaa
tctttgtggagcttttctctacgtaaagacagtcaaagccacgaattctcccagagaaca
tctgccactaccaatggtaagcgaaatgctggcctcgctggtagcggactgcgggagaag
ttttctgaaatcactgatctggcctaccaggcaaataaacaaaataggtgggataatatc
attactgcccataaaaacttggattatgctagaacttggagcggtagtaggggtatagtt
ggaaagtacaatctccatactctagatggaggcatagtaaagagtgtaggaatctcacaa
tgcggcaactttgggttgataggctcatcccagggtagtattgctgtttacaaccttcag
agtggtactctgagacgcaaaatagtgacaactagtcacaaaaaggctgtgacgggtata
gcatcggatagcttcaacaaggtgattatcagttgctcattagaaggttttgtaatgttt
catgatttccataatgcctcgcgaattggcaaaataaaccttgagtcatctgctcttcaa
atgagatttcattccagatccaacctgttggccgtcgctcttgataacctttctgttgtt
gttattgatatccaaacacgacgtgttatccgtgaactatggggtcataccaatgctatt
acttctttcgacttcactcctgatggacgttggattatttcggcttcgttggatagctca
ataaggacttgggatattccgtcgggtggctgcatagacgctgttaaggtgaacaatata
gtaacatgcttgaaagtaagccccaatggcgaatggctggccacttcccatgttcaaggt
gctggtgttcaactctggaccatgaagtcccagtttcagaaaatttcaacccgtacgatt
tctgaagatgaggttaatgacatagtcatgccaaactctactggtgaaggtggatctaat
attatagaaggcgcatttgaacttgcccaggatgagacggatatggatcaatctgattgg
aactctccaaatactttgagcgacaagctacagacgttgagcttattaccaaaaactaaa
ctgaataccttggtacatttagatcttataaaactcagaaataagcctaaagaggctcca
aaggtacctgaaaaatcgccattttttctgggtgttccaggtgtagagtcagaaagacaa
gaaaccagtgagggacctttcaatcaaccaaaaatgaagaacactatttcatctgagtcc
acattcacccgtcttctaaggagtggcgatgtagaagggtttttgacccacctcaagggc
ctctctccctctgccactgatctggagattcgctccctcaacacattccctccactgaat
gagtttatatctttcattgatgcgttaacctaccagcttcagcagaagagagattatgaa
ctagttcaggcatggatgacaatgctacttagaatccacggggacattattttggccaat
cagaaggacagtgaccttattgcatctctgtcgtcttttgagacggaacaagactccgaa
tctgtaagacttgacaagcttactaaatactgctcgggagtcttaaactatctaagaact
gcatag
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