Streptomyces lydicus 103: SL103_00125
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Entry
SL103_00125 CDS
T04699
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
slc
Streptomyces lydicus 103
Pathway
slc00550
Peptidoglycan biosynthesis
slc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SL103_00125
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slc01011
]
SL103_00125
Peptidoglycan biosynthesis and degradation proteins [BR:
slc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SL103_00125
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AOP44870
UniProt:
A0A1D7VDR4
LinkDB
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Position
complement(29159..30628)
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AA seq
489 aa
AA seq
DB search
MNKPLRRVAIFCGLLVLALLVRVNWVQFVEGDQLKNDTNNRRVAIERYSTPRGNIIVDGK
AITGSTTTDSGDFKYKRTYKNGKMWAPVTGYASQAFDANQLEKLNDGILTGTDDRLFFSR
TVDMFTGSKQKGGNVVTTLDAKAQKAAFEGLGNQKGAVAAINPETGAILALASTPSYDPS
TFAGMSNKDAEAYNGLLKKNNPDEPMLNRALRQTYPPGSTFKVVTASAALENGLYTDVDA
KTDSPVPYTLPDTAGLPLKNEGSIQCENVSLREALRLSCNTVFGKVSADLGNKKMKAEAE
KFGFNNSKIDTPVRAAESIFPTDNRPQNAMAGIGQASNRATPLQMAMVASAVANGGKLMR
PYMVDQLVAPNLNVVQQHTPQEMSRPLSPENAQKIQSIMETVVKSGTGTNAQIPNVTVGG
KTGTAQHGENNKDNPYAWFISYAKTDKGTPVAVAVVIEGSDTLRDDIAGGKLAAPIAKRV
MEAVLEGEK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcctctgcgccgggtcgcgatcttctgcggcctgctcgtcctcgccctgctc
gtccgcgtcaactgggtgcagttcgtcgagggcgaccagctcaagaacgacacgaacaac
cgccgggtggccatcgagcgctacagcacgccgcgcggcaacatcatcgtcgacggcaag
gcgatcaccggctcgacgaccaccgacagcggcgacttcaagtacaagcggacgtacaag
aacggcaagatgtgggcgccggtcaccggctacgcctcgcaggcgttcgacgccaaccag
ctggagaagctcaacgacggcatcctcaccggcaccgatgaccggctcttcttcagccgc
acggtcgacatgttcaccggcagcaagcagaagggcggcaacgtcgtcacgacgctggac
gccaaggcgcagaaggcggccttcgagggcctgggcaaccagaagggcgcggtcgccgcg
atcaacccggagaccggggcgatcctggcgctggccagcaccccgtcgtacgacccgtcc
acgttcgccggcatgagcaacaaggacgccgaggcgtacaacggtctgctgaagaagaac
aaccccgacgagccgatgctcaaccgggcgctgcggcagacctacccgccgggctccacc
ttcaaggtcgtcacggcctcggcggcgctggagaacggcctgtacaccgacgtcgacgcc
aagaccgactcgccggtcccgtacacgctgcccgacaccgccggccttccgctgaagaac
gagggctccatccagtgtgagaacgtcagcctgcgcgaggcgctgcgcctgtcgtgcaac
acggtcttcggcaaggtcagcgctgacctcggcaacaagaagatgaaggccgaggcggag
aagttcggcttcaacaactccaagatcgacaccccggtgcgggccgcggagagcatcttc
cccaccgacaaccggccgcagaatgccatggccggtatcgggcaggcgtccaaccgggcc
acgccgctgcagatggccatggtcgcttcggcggtcgccaacggcggcaagctgatgagg
ccgtacatggtcgaccagctggtcgcgccgaacctcaacgtggtgcagcagcacacgccg
caggagatgagccggccgctcagcccggagaacgcgcagaagatccagagcatcatggag
accgtcgtcaagagcggcacgggaaccaatgcacagatcccgaacgtcacagtcgggggt
aagacgggtaccgcccagcacggcgagaacaacaaggacaacccgtacgcctggttcatc
tcctacgcgaagaccgacaagggcacccccgtagcggtcgctgtcgtcattgagggatcc
gacacccttcgcgatgacatcgccggtggcaagctcgccgctcccatcgcgaagcgcgtc
atggaggcggtactcgaaggcgagaagtga
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