Streptomyces lydicus 103: SL103_01370
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Entry
SL103_01370 CDS
T04699
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_01370
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SL103_01370
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AOP45069
UniProt:
A0A1D7VEB1
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All DBs
Position
complement(307757..308218)
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AA seq
153 aa
AA seq
DB search
MSVQARRDTVPEIAVRRLLYASGHRYRLQRRVPGFARRTIDIAFPGPKVAVFLDGCFWHG
CPEHATRPKANADWWRAKLDGNIARDRETTAHLVELGWTVLRFWEHEDPAAVADRIAGVV
SSMARRRRREPHVREDDSGSRPSASPDTTAPKA
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccaggcccgtcgggacaccgtccccgaaatcgctgtccggcgcctcctgtac
gcctcgggccatcgctacagactgcagcgccgcgtccccggtttcgcccgccgcaccatc
gacatcgccttcccgggccccaaggtcgcggtgttcctcgacggctgcttctggcacggc
tgccccgaacacgccacccgtcccaaggccaatgccgactggtggcgcgcaaagctcgac
ggcaacatcgcccgcgaccgggagacgaccgcgcacctcgtggagctcggttggacggtg
ctgcgcttctgggagcacgaggacccggcggccgtggcggaccgcatcgcgggggtcgtc
tcctccatggcacgacgccgacgccgagaaccccacgtccgtgaggacgactccgggtcg
cgtccgtcggcctcgcccgacacgaccgcgccgaaagcgtag
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