Streptomyces lydicus 103: SL103_02910
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Entry
SL103_02910 CDS
T04699
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SL103_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slc03019
]
SL103_02910
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_02910
Enzymes [BR:
slc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SL103_02910
Messenger RNA biogenesis [BR:
slc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SL103_02910
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SL103_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
AOP45334
UniProt:
A0A1D7VEZ7
LinkDB
All DBs
Position
complement(645519..647504)
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AA seq
661 aa
AA seq
DB search
MAQADVEMVVDMDVEGAPEAGEAVQVLRRVFGYDAFRGSQQEIIEHVIGGGDAVVLMPTG
GGKSLCYQIPSLVRSGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDLEERRLVEAE
FLSGELDLLYLAPERLRVEQTLSLLDRGKISLFAIDEAHCVAQWGHDFRPDYLALSMLHE
RWPEVPRIALTATATEATHSEISSRLRMADARHFVASFDRPNIQYRIATKSDPKRQLLEL
LRGEHPGDAGIVYCLSRASVEKTAQFLVDNGIEAVPYHAGLDARTRAANQARFLREDGLV
VVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQR
KMIDGSEGDEAHRRRLSAHLDAMLALCETVQCRRVRLLAYFGQESTPCGNCDTCLAPPQT
WDGTVPAQKLLSTVVRLQRERGQKFGAGQLIDILMGKKTAKVIQFDHDQLSVFGVGADLR
EAEWRGVVRQLLAQGLIAVEGDYGTLVLTDTSGEVLRGAREVPMRREPEKPARAARSKSS
GKRAPVDLPEEALPVFEALRGWRGRTAKEQGVPAYVIFHDATLREIATARPATVAALGAV
NGVGENKLAKYGQQILDVLAGGDGGDGGEAPAAAPAGRAAAAEPEPADEEALPEPPDDID
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcggacgtggaaatggtcgtggacatggatgtggaaggcgctcccgaggcg
ggcgaggcggtgcaggtgctgcgccgggtcttcggctacgacgcgttccgcggcagtcag
caggagatcatcgagcacgtcataggcggcggggacgccgtcgtcctgatgccgaccggt
ggcggcaaatcgctgtgttaccagattccctcgctggtcagaagcggtgtcggggtggtg
atctcgccgctgatcgccctgatgcaggaccaggtcgacgccctgcgggcgctcggtgtg
cgggccggtttcctcaattcgacgcaggacctggaggagcggcggctggtcgaggccgag
ttcctctccggagagctggatctgctctacctcgcaccggagcggctgcgggtggagcag
acgctgagcctgctggaccgcggcaagatctcactgttcgcgatcgacgaggcacactgc
gtcgcccagtggggccacgacttccggccggactacctggcgctgtcgatgctgcacgag
cgctggcccgaggtgccgcggatcgcgctgaccgccaccgccaccgaggccacccacagt
gagatcagcagccggctgcggatggcggacgcccggcacttcgtcgccagcttcgaccgg
ccgaacatccagtaccggatcgcgaccaagagcgacccgaagcggcagctgctggagctg
ctgcgcggggagcacccgggcgacgcgggcatcgtctactgcctctcgcgcgcctcggtg
gagaagaccgcgcagttcctggtggacaacggcatcgaggcggtgccgtaccacgccggc
ctcgacgcccgcacccgcgccgcgaaccaggcgcgcttcctgcgggaggacgggctggtc
gtggtggccaccatcgccttcggcatgggcatcgacaagccggacgtgcggttcgtggcg
cacctggacctgccgaagtcggtggagggctactaccaggagaccggccgcgccgggcgc
gacggccagccgtcgacggcctggctggcgtacggcctccaggacgtggtgcagcagcgc
aagatgatcgacgggtcggagggcgacgaggcgcaccgccggcggctgtcggcgcacctc
gacgcgatgctggcgctgtgcgagacggtgcagtgccggcgggtccggctgctggcctac
ttcggccaggagagcaccccctgcggcaactgcgacacctgcctggcgcccccgcagacc
tgggacggcacggtccccgcgcagaagctgctgtcgacggtggtgcggctgcagcgcgag
cgggggcagaagttcggcgccggccagctcatcgacatcctgatgggcaagaagaccgcg
aaggtcattcagttcgaccacgaccagctgagcgtcttcggggtgggcgccgatctccgc
gaggccgaatggcggggcgtggtgcggcagttgctggcacagggcctgatcgccgtcgag
ggtgactacggcaccctcgtgctcacggacaccagcggcgaggtgctgcgcggcgcgcgc
gaggtgccgatgcggcgggagccggagaagcccgcgcgggcggcccggtccaagtcgtcg
ggcaagcgggcgccggtggacctgcccgaggaggcgctgccggtcttcgaggcgctgcgc
ggctggcgggggcgtacggccaaggagcagggcgtccccgcgtatgtgatcttccacgac
gccacgctccgggagatcgccaccgcccggccggcgacggtcgccgcactgggcgcggtc
aacggcgtcggcgagaacaagctcgcgaagtacgggcagcagatcctggacgtcctggcc
ggcggcgacggcggcgacggcggggaggccccggcggccgcgcccgcgggccgggccgcg
gcagccgagcccgagccggcggacgaagaggcactgcccgagccgccggacgacatcgac
tggtga
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