Streptomyces lydicus 103: SL103_03960
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Entry
SL103_03960 CDS
T04699
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc00300
Lysine biosynthesis
slc00470
D-Amino acid metabolism
slc01100
Metabolic pathways
slc01110
Biosynthesis of secondary metabolites
slc01120
Microbial metabolism in diverse environments
slc01230
Biosynthesis of amino acids
Module
slc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SL103_03960
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SL103_03960
Enzymes [BR:
slc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SL103_03960
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Atrophin-1
Motif
Other DBs
NCBI-ProteinID:
AOP45507
UniProt:
A0A1D7VFM6
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All DBs
Position
complement(905490..906872)
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AA seq
460 aa
AA seq
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MSLTDREPEREPDRDRERARERDRAVRAAVARGLVGPDEPVAGLLDVDGVRRSAGELRAA
FEEFVAPGTPVLHAFAVKAASLVPVLRLLAREGLGCEVASPGELALARAAGVPATRTVLD
SPAKTTAELREALALGIAVNADNPEELARLDALTAAAPSAAPLGLRVNPQIGGGTIGAMS
TATDTSKFGIALRDEGAREWVVRAFLARPWLTRLHAHVGSQGMPLELMAAGVLATFELAE
EINAKAGRRQIDTLDIGGGLPVNFSSDAVTPDYRAYVALLHSTVPGLFSGRYGLVTEFGR
SLLAKHGTILARVEYAKSAGGRPIAVTHAGAQVATRTVFVPEAWPLRVAAYDAEGRPKTG
EPVAQDVAGPCCFAGDLIAENRPLPRLESGDHAALLDTGAYYFSTHFAYNSLPRPGIYGY
AADPDGTLRFATVRTPQTLEELTAESGAAHTEALDGLGGR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaccgaccgagaaccggaacgagaaccggaccgagatcgcgagcgggcccgc
gagcgggaccgcgccgtgcgcgcggccgtggcgcgggggctggtcgggccggacgagccc
gtcgccgggctgctggacgtcgacggggtgcgccggtcggcgggtgaactgcgcgccgcc
ttcgaggagttcgtcgcgcccggcaccccggtgctgcacgcgttcgcggtgaaggccgcc
tcgctcgtgcccgtgctgcggctgctcgcacgggagggcctcggctgcgaggtggccagt
cccggtgagctggcgctggcccgcgccgccggggtgcccgccacccgcaccgtgctggac
tcaccggccaagaccaccgcggaactgcgcgaggcgctcgccctcgggatcgccgtcaac
gccgacaaccccgaggaactggcacgtctcgacgcgctgaccgccgccgcgccgagtgcc
gcaccgctgggcctgcgggtcaatccgcagatcggcggcggcaccatcggcgcgatgagc
accgccaccgacacctccaagttcgggatcgcgctgcgcgacgagggcgcccgcgagtgg
gtcgtacgggccttcctggcccggccgtggctgacccggctgcacgcccacgtgggctcc
cagggcatgccgctggagctgatggccgccggcgtcctggccacgttcgaactggccgag
gagatcaacgcgaaggccggccggcgtcagatcgacaccctggacatcggcggcggcctg
ccggtgaacttctcctcggacgccgtcacccccgactaccgcgcgtacgtggcgctgctg
cactccaccgtgcccggactgttctccggccgctacggcctggtcaccgagttcggccgg
tcactgctggccaagcacggcacgatcctcgcccgcgtggagtacgcgaagtcggcgggc
ggccgccccatcgcggtcacccacgccggcgcccaggtcgccacccgtacggtcttcgtt
cccgaggcgtggccgctgcgggtcgccgcctacgacgccgagggccgccccaagacaggc
gagccggtcgcccaggacgtcgcggggccctgctgcttcgccggcgacctgatcgccgag
aaccgtccgctgccgcgcctggagtccggcgaccacgccgctctcctggacaccggcgcg
tactacttctccacccacttcgcctacaactccctcccccgccccggcatttacggctat
gcggccgatcccgacggcacgctccgcttcgcgaccgtccgcacgccccagaccctggag
gaactcaccgccgagagcggcgccgcccacacggaggcgctggacggcctcggggggcgg
tga
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