Streptomyces lydicus 103: SL103_04005
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Entry
SL103_04005 CDS
T04699
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slc03021
]
SL103_04005
Transcription machinery [BR:
slc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SL103_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
HTH_3
HTH_24
HTH_10
DUF7343
MarR
Apolipoprotein
DUF1492
GerE
Motif
Other DBs
NCBI-ProteinID:
AOP50971
UniProt:
A0A1D7VW67
LinkDB
All DBs
Position
complement(915578..916516)
Genome browser
AA seq
312 aa
AA seq
DB search
MSPRLDELRTDDYRQSASSTPLSDLTGQIPSQSGPAEPDPAGMSEVDGLPEIPPFDEVGP
VDARALSKTLFERLESLEEGTHEHAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVG
TIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGD
ELAQKLDRAPTVQELADRLDITRDEVVEGMAASNAYTASSLDAQPEEDDNEGALADRIGY
EDHGLEGIEYVESLKPLIAELPSRDRTILSLRFVANMTQSEIGEELGISQMHVSRLLSRT
LVKLRKGLMIDE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaactgcgtaccgacgattaccggcagtccgcatcgtcgaca
cccctgtccgacctcaccggtcagatcccttcccagtccggccctgccgaaccagacccg
gcaggaatgtctgaggtcgacggtctgcccgagatcccgccgttcgacgaggtgggcccg
gtggacgcgagggctctgtccaagaccctcttcgagcggctcgaatcgctggaggaaggc
acccacgaacacgcgtacgtccgcaacaccctggtcgagctcaatctcgccctcgtgaag
ttcgcggcctcccggttccgctcccgcagcgagcccatggaggacatcgtccaggtcggc
acgatcggcctgatcaaggcgatcgaccgcttcgaactcagccgtggcgtggagttcccg
acgttcgcgatgccgaccatcgtcggcgagatcaagcgcttcttccgcgacaccagctgg
tcggtgcgggtacccaggcggctgcaggaactgcggctggacctcgccaaggccggcgac
gaactggcccagaagctggaccgcgcccccacggtgcaggaactcgccgaccgcctggac
atcacccgtgacgaggtcgtcgaggggatggccgcgagcaacgcctacaccgcgagctcg
ctggacgcccagcccgaggaggacgacaacgagggcgcgctggcggaccgcatcggctac
gaggaccacggcctggagggcatcgagtacgtcgagtccctcaagccgctgatcgccgaa
ctcccctcgcgtgaccgcacgatcctctcgctgcgcttcgtcgccaacatgacgcagtcc
gagatcggcgaggagctgggcatctcccagatgcacgtctcccgtctgctctcccgcacg
ctcgtgaagctccgcaagggcctgatgatcgacgagtga
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