Streptomyces lydicus 103: SL103_06780
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Entry
SL103_06780 CDS
T04699
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
slc
Streptomyces lydicus 103
Pathway
slc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SL103_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slc03021
]
SL103_06780
Transcription machinery [BR:
slc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SL103_06780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
AOP45983
UniProt:
A0A1D7VGU5
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Position
1599749..1600996
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AA seq
415 aa
AA seq
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MPESSERGGSGRTPPETPAEPLSMYGTDGGPAATVPGLSAASAAITLEVAPVQTQTLADA
PAAAEPADEPAPEPVTVVQQPEPPAAEMLLEEIPQESAAAPDPGPAPRPETGGPSSDLFR
QYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLTNTPDLSSQLAHDLDRLVVLGRMAKR
RLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQ
AMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAAHLDLTEGRVSEV
LRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLREHLDAVLSTLGERERK
VVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcatcggagcgcggcgggtccggtcgtacgcccccggaaacccccgcggaa
ccgctctcgatgtacgggacggacggcggcccggccgccaccgtacccggcctttctgcc
gcctcagcagcgatcaccctggaggtcgcccccgtgcagacccagaccctcgccgacgcg
ccggccgccgcggaacccgccgacgagccggccccggagccggtcaccgtggtgcagcag
cccgaaccgcccgccgccgagatgctcctggaggagatcccccaggagtcggcggcggcc
ccggacccaggccccgcgccccgcccggagaccggcggcccgtcctccgacctcttccgc
cagtacctccgcgagatcggccggatcccgctgctcaccgccgccgaggaggtcgagctc
gcgcgccgcgtggaagccggcctcttcgccgaggagaagctcaccaacacccccgacctc
tcctcccaactcgcccacgacctcgaccggttggtggtcctggggcggatggccaagcgc
cgcctgatcgaggcgaacctgcgcctggtggtctccgtcgccaagcgctacgtcggccgc
ggcctgaccatgctcgacctcgtccaggagggaaacctcggactgatccgcgccgtcgag
aagttcgactacgcccgcggctacaagttctccacctacgcgacctggtggatccgccag
gcgatgtcccgcgcgctggccgaccaggcccggaccatccgcgtcccggtccacgtcgtc
gagctgatcaaccgcgtggtgcgggtccagcgccggatgctccaggaacgcggctacgaa
cccacccccgaggaggtcgccgcccacctcgacctcaccgagggacgcgtcagtgaagtg
ctgcggctggcccaggaaccggtctcgctgcacgcccccgtcggcgaggaggaggacgtc
gccctcggcgacctcatcgaggacggcgacgccgcctcacccgtcgaatccgccgcgttc
ctgctgctccgcgagcacctcgacgcggtgctgtccactctcggcgaacgcgaacgcaag
gtcgtccagctccgctacgggctcgccgacggccggccccgcaccctggaggagatcggc
cggatcttcggcgtcacccgcgaacgcatacggcagatcgagtccaagaccctcaacaag
ctccgcgaccacgccttcgccgaccagctccgcggctacctggactga
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