Streptomyces lydicus 103: SL103_09535
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Entry
SL103_09535 CDS
T04699
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
slc
Streptomyces lydicus 103
Pathway
slc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SL103_09535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_09535
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SL103_09535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
HHH
UVR
HHH_2
RecR_HhH
UPF0758_N
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
AOP51093
UniProt:
A0A1D7VWI2
LinkDB
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Position
2227687..2229756
Genome browser
AA seq
689 aa
AA seq
DB search
MADPSSYRPKPGQIPDSPGVYKFRDEHGRVIYVGKAKSLRQRLANYFQDLAGLHPRTRTM
VTTAASVEWTVVTTEVEALQLEYSWIKEFDPRFNVKYRDDKSYPYLAVTLNEEFPRVQVM
RGAKKKGVRYFGPYAHAWAIRETVDLMLRVFPVRTCSAGVFKRSAQIGRPCLLGYIGKCS
APCVGRIPAEEHRELAEEFCDFMAGRTGAYLRRLERRMQEAAEEMEYERAARLRDDIGAL
KRAMEKSAVVLADATDADLIAVAEDELEAAVQIFHVRGGRVRGQRGWVTDKVEAVTTAGL
VEHALQQLYGEEQGDAVPKEVLVPALPEPVEPVAQWLSQRRGSQVSLRIPQRGDKKDLMA
TVGRNAQQALALHKTKRASDLTTRSRALEEIAEALGLDSVPLRIECFDISHLQGEDVVAS
MVVFEDGLVRKSEYRRFQIKGFEGQDDVRSMHEVIGRRFKRYLQEKQKSGEWTEEPDGAT
AAPVDGVVTASGEPDPADGRPVDDDGRPKRFAYPPQLVVVDGGAPQVAAARRALDELGID
DVAVCGLAKRLEEVWLPGEDDPVVLPRSSEGLYLLQRVRDEAHRFAITYQRNKRSKRLKS
SPLDAVPGLGDTRRQALLKHFGSLKKLRAATVDEICAVPGVGRKTAETVAAALAGAAPSA
PAVNTATGEIIEDDGAPPAALSAERGQER
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccagcagctaccgacccaagccgggacagatccccgactcgccgggggtc
tataagttccgcgacgaacacggccgcgtcatctacgtgggcaaggccaagagcctgcgc
cagcgcctggccaactacttccaggacctggccggtctccacccgcgtacccgcacgatg
gtcaccaccgccgcctccgtggagtggaccgtcgtcaccaccgaggtcgaggcgctccag
ctcgaatacagctggatcaaggagttcgacccccgcttcaacgtcaagtaccgcgacgac
aagagctatccgtacctcgcggtgaccctcaacgaagagttcccgcgcgtccaggtcatg
cgcggcgccaagaagaagggcgtgcgctacttcggcccgtacgcgcacgcctgggccatc
cgcgagaccgtcgacctgatgctccgcgtcttccccgtacgcacctgctccgccggcgtg
ttcaagcgttccgcccagatcggccgcccctgtctgctcggctacatcggcaagtgctcc
gcgccctgcgtcggccggatccccgccgaggagcaccgcgaactggccgaggagttctgc
gacttcatggccggccgcaccggcgcctacctccgccgcctggagcgccgcatgcaggag
gccgccgaggagatggagtacgagcgcgccgcccggctgcgggacgacataggcgcgctc
aagcgggcgatggagaagagcgccgtggtgctggccgacgccaccgacgccgacctgatc
gcggtcgccgaggacgagctcgaagccgccgtccagatcttccacgtccgcggcggccgg
gtgcgcggccagcgcggctgggtcaccgacaaggtcgaggccgtcaccaccgctggcctc
gtcgaacacgccctccagcagctgtacggcgaggagcagggggacgccgtccccaaggag
gtcctggtcccggcgctgcccgagcccgtcgagccggtcgcccagtggctctcccagcgc
cgcggctcccaggtctcgctgcgcataccgcagcgcggcgacaagaaggacctgatggcc
acggtcggccgcaacgcccagcaggcgctggcgctgcacaagaccaagcgggcctccgac
ctgaccacccgctcccgcgccctggaggagatcgccgaggccctcggtctggactcggtc
ccgctgcgcatcgagtgcttcgacatctcccacctccagggcgaggacgtggtcgcctcg
atggtggtgttcgaggacgggctcgtccggaagagcgaataccgccgcttccagatcaag
ggcttcgagggccaggacgatgtccggtccatgcacgaggtcatcggccgccgcttcaag
cgctatctccaggagaagcagaagtcgggggagtggacggaggagcccgacggcgcaacc
gccgcccccgtggacggtgtggtcaccgcctccggggagccggacccggccgacggccgc
cccgtcgacgacgacggccgccccaagcggttcgcctaccctccccagctcgtggtcgtc
gacggcggcgctccccaggtcgcggccgcccgccgggccctggacgagctcggcatcgac
gacgtcgcggtgtgcggcctggccaagcgcctcgaagaggtctggctgcccggggaggac
gacccggtcgtgctgccccgcagcagcgaggggctctacctcctccagcgggtccgcgac
gaggcgcaccgcttcgcgatcacctaccagcgcaacaagcgcagcaagcggctgaagtcc
tcgccgctcgacgccgtaccgggcctgggcgacacccgccgccaggcactcctcaagcac
ttcggctcgttgaagaagctgcgcgccgcgacggtcgacgagatctgcgcggtccccggc
gtgggccgcaagaccgccgagacggtcgccgcggcgctggccggggcggcgccgtccgct
cctgcggtgaacaccgccacaggagagatcattgaggatgacggggccccaccggccgcg
ttgtcggcagaacgggggcaggaacgatga
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