Streptomyces lydicus 103: SL103_12605
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Entry
SL103_12605 CDS
T04699
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc00523
Polyketide sugar unit biosynthesis
slc01100
Metabolic pathways
slc01110
Biosynthesis of secondary metabolites
slc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SL103_12605
Enzymes [BR:
slc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
SL103_12605
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AOP46982
UniProt:
A0A1D7VJR0
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Position
2940259..2941563
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AA seq
434 aa
AA seq
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MTDSKARILEQVRGYHQEHESRGFTPGVTPIWPSGAVLDEDDRVALVEAALDMRIAAGVS
SRRFERELAKALGLRKAHLTNSGSSANLLALSALTSPQLEDRRLRPGDEVITVAAGFPTT
VNPILQNGMVPVFVDVELGTYNTTPERIAEAIGPRTRAIMVAHALGNPFAAAEVAELAEA
HDLFLVEDNCDALGSTYRGQLTGTFGDLATVSFYPAHHITTGEGGSVLTSNLALARIVEQ
LRDWGRDCWCEPGEDNTCFKRFDYQMGTLPHGYDHKYIFSHVGYNLKSTDLQAALGLSQL
AKLPAFGEARRRNWQRLREGLEGVPGLLLPRATEGSDPSWFGFALTVLPDASFKVKELTD
FLESRKIGTRRFFSGNLTRHPAYLDRPHRVVGDLVNSDTVTGSTFWIGVFPGLTEEMTDY
VSASIREFVCGTAN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagcaaggcgcggatcctggagcaggtgcgcggctaccaccaggagcacgaa
agccggggattcaccccgggggtcacccccatctggccgtccggcgccgtactcgacgag
gacgaccgggtcgcgctggtcgaggcggcgctggacatgcggatcgcggccggggtcagc
tcccgcaggttcgagcgggagctggccaaggccctcggtctgcgcaaggcgcatctgacc
aactccggttcgtcggcgaacctgctggccctgtcggcgctgacctcaccgcagctggag
gaccgccgactgcggcccggcgacgaggtgatcaccgtggcggccggcttcccgaccacg
gtcaaccccatcctgcagaacggcatggtcccggtcttcgtcgacgtcgagctggggacg
tacaacaccaccccggagcggatcgccgaggcgatcgggccccgcacccgcgcgatcatg
gtcgcgcacgccctgggcaacccgttcgccgcggccgaggtcgccgaactcgccgaggcg
cacgacctgttcctcgtcgaggacaactgcgacgccctgggctcgacctaccgagggcag
ctcaccgggaccttcggggacctggcgaccgtcagcttctatcccgcgcaccacatcacc
accggcgagggcggcagcgtgctcacgtcgaacctcgcgctcgcccggatcgtcgagcaa
ctgcgggactggggccgggactgctggtgcgaaccgggcgaggacaacacctgcttcaag
cggttcgactaccagatgggcacgctgccgcacggctacgaccacaagtacatcttctcc
cacgtcgggtacaacctgaagtccaccgacctccaggccgccctggggctgagccagctc
gccaagctccccgcgttcggcgaggcccgccgccgcaactggcagcgtctgcgggagggg
ctggagggcgtgcccggactgctgctgccgcgggccaccgagggcagcgaccccagctgg
ttcggcttcgccctcaccgtgctgcccgacgcctcgttcaaggtcaaggagctgaccgac
ttcctggagtcccgcaagatcggcacccgccgcttcttcagcggcaacctcacccgccac
cccgcctacctcgaccggccgcaccgggtggtcggcgacctcgtcaactccgacacggtg
accgggagcaccttctggatcggcgtcttcccgggcctgaccgaggagatgacggactac
gtcagcgcctcgatccgggagttcgtatgcggtaccgcgaactga
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