Streptomyces lydicus 103: SL103_16030
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Entry
SL103_16030 CDS
T04699
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slc03021
]
SL103_16030
Transcription machinery [BR:
slc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SL103_16030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_37
HTH_Crp_2
MarR_2
HTH_23
HTH_3
HTH_24
Sigma70_ECF
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AOP51238
UniProt:
A0A1D7VXL3
LinkDB
All DBs
Position
complement(3692353..3693168)
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AA seq
271 aa
AA seq
DB search
MSAPCSELPLIESPEQLAPSDARELTHLFFERLEHLEEGTHEYQYARNTLIEMNLSLVRF
AARRFRNRGDDFEDIVQVGTIGLIKAIDRYDLSRNVEFTTLAIPYITGEMKRFFRDTTWD
VRVPRRLQELRVDLARAGEHLANELGRDPKVPELAAHLNIPEEEVIEGQVAANGYSASSI
DVTISDDGNDAPLADLLGDYDEDMGLFEDLHTLKPLLDQLEERDRRILELRFGQELTQAQ
IGELLGISQMHVSRLLNRCLARLRTAMLRTD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgctccgtgctccgagctgcccctgatcgagtcgcccgagcagctcgcccccagc
gacgcccgggagctgacccatctcttcttcgagcggttggaacacttggaggagggcacg
cacgagtaccagtacgcgcgcaacaccctcatcgagatgaacctgtccctggtgcgcttc
gcggcccgtcggttccgcaatcgcggtgacgacttcgaggacatcgtgcaggtcggcacg
atcggtctgatcaaggccatcgaccgctacgacctctcgcgcaacgtcgagttcaccacc
ctcgccatcccgtacatcacgggcgagatgaagcgcttcttccgtgacaccacctgggac
gtgcgggtcccccggcggctgcaggaactgcgggtcgacctcgcccgcgccggtgagcac
ctcgccaacgagctgggccgggaccccaaggttcccgagctggcggcacacctgaacatc
ccggaggaagaggtcatcgaggggcaggtcgccgccaatggctacagcgcctcctccatc
gacgtcaccatcagcgacgacggcaacgacgcgccgctggcggacctgctcggtgactac
gacgaggacatgggcctcttcgaggatctgcacaccctcaagccgctgctggaccagctg
gaggagcgcgaccgccggatactggaactccgcttcggccaggaactgacccaggcccag
atcggcgaactgctcggcatctcccagatgcacgtctcgcgcctgctcaaccgctgcctg
gcccggctccgcaccgccatgctccgcacggactga
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