Streptomyces lydicus 103: SL103_17780
Help
Entry
SL103_17780 CDS
T04699
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
slc
Streptomyces lydicus 103
Pathway
slc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SL103_17780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slc03019
]
SL103_17780
03009 Ribosome biogenesis [BR:
slc03009
]
SL103_17780
04131 Membrane trafficking [BR:
slc04131
]
SL103_17780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slc04147
]
SL103_17780
Messenger RNA biogenesis [BR:
slc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SL103_17780
Ribosome biogenesis [BR:
slc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SL103_17780
Membrane trafficking [BR:
slc04131
]
SNARE
SNARE associated proteins
Others
SL103_17780
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SL103_17780
Exosome [BR:
slc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SL103_17780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_5
RuvB_N
AAA_28
AAA_14
NACHT
AAA_16
AAA_lid_3
AAA_22
AAA_33
AAA_18
TsaE
Acetyltransf_10
TIP49
AAA_25
AAA_17
AAA_2
AAA_24
Acetyltransf_6
AAA_11
AAA_19
RNA_helicase
nSTAND3
Cytidylate_kin
AAA_30
SKI
ABC_tran
IPT
ATPase
DUF5906
Motif
Other DBs
NCBI-ProteinID:
AOP47848
UniProt:
A0A1D7VMV6
LinkDB
All DBs
Position
complement(4102340..4103629)
Genome browser
AA seq
429 aa
AA seq
DB search
MNWLIHDYREKDLAEVVHLIDSTAELGQESVFSLAECISALTSRQPAVVAVHQGAPIGAA
LACVAGERGWVMRIAISSAWRGRGLASALLVELERRLMAARVSRIAYVLPEEELLGEGLL
NAGYTRQPAVAYFEKVEPHHGPAAGLLEDLGGRFLPADLWSKVAGMEAEKDLIERRVVLP
LAEPERAARHGVRPPRAVALFGPPGTGKTTFARGIAARLGWPFVELLPSRLADEGNLANA
LRSAFARIAELERVLVFIDEVEEIAPVRNEPAQPGGLHGVTNELLKLIPGFRERDERLLV
CATNSIRSLDPAFLRPGRFDYVIPIGTPDPAARSAIWSRYTDGRAEVDVAALVAASELFT
PADIEHAARMAAQASFERDLEAVGVGAGAHGRLGAGTQDYLAALDRCRPTVTPAMIDEFT
ADITAHARC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaactggctcatccacgattaccgcgagaaggatctcgccgaggtggtccacctgatc
gactccacggccgagctcgggcaggagtccgtgttctcgctcgccgagtgcatcagcgcg
ctgacctcccggcagcccgccgtggtggccgtccaccagggggcgcccatcggtgcggcg
ctcgcgtgtgtcgcaggtgagcggggctgggtgatgcggatcgcgatctcctccgcctgg
cgcggccgcgggctggcgagcgccctgctggtggagctggagcggcggctgatggccgcc
cgggtgagccggatcgcctacgtactgcccgaggaggagctgctcggggagggcctgctc
aacgcgggctacacccgtcagcccgcagtggcctacttcgagaaggtcgagccgcaccac
gggcccgcggccggcctcctggaggacctcggcggccggttcctgccggccgacctctgg
tcgaaggtggccggcatggaggcggagaaggacctcatcgagcggcgggtggtgctgccg
ctggcggagccggagcgggcggcccggcacggggtccgaccgccgcgggcggtcgccctg
ttcggcccgccggggaccgggaagaccaccttcgcgcggggcatcgccgcccggctgggc
tggccgttcgtcgagctgctgccgtcccgactggccgacgagggcaatctcgcgaacgcg
ctgcgcagcgcgttcgcccggatcgcggagctggagcgggtgctggtcttcatcgacgag
gtcgaggagatcgcaccggtccgcaacgagccggcgcagcccggcggactgcacggggtg
accaacgagctgctgaagctgataccgggcttccgggagcgcgacgagcggctgctggtg
tgcgccaccaactccatccgctcgctggacccggcgttcctgcggcccggccgcttcgac
tatgtgattccgatcggaacgccggacccggcggcccgctcggcgatctggtcgcggtac
acggacgggcgggccgaggtggatgtcgcggccctggtggcggccagcgagctgttcacc
ccggccgacatcgagcacgccgcgcggatggcggcgcaggcgtcgttcgagcgggatctg
gaggcggtcggggtcggcgcgggtgcccacgggcggctcggtgcgggcacccaggactat
ctcgccgccctcgaccggtgccggccgacggtcaccccggcgatgatcgacgagttcacc
gcggacatcacggcgcacgcccgctgctga
DBGET
integrated database retrieval system