KEGG   Streptomyces lydicus 103: SL103_17780
Entry
SL103_17780       CDS       T04699                                 
Name
(GenBank) AAA family ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
slc  Streptomyces lydicus 103
Pathway
slc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:slc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SL103_17780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slc03019]
    SL103_17780
   03009 Ribosome biogenesis [BR:slc03009]
    SL103_17780
   04131 Membrane trafficking [BR:slc04131]
    SL103_17780
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slc04147]
    SL103_17780
Messenger RNA biogenesis [BR:slc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     SL103_17780
Ribosome biogenesis [BR:slc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    SL103_17780
Membrane trafficking [BR:slc04131]
 SNARE
  SNARE associated proteins
   Others
    SL103_17780
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    SL103_17780
Exosome [BR:slc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SL103_17780
SSDB
Motif
Pfam: AAA Acetyltransf_1 Acetyltransf_7 AAA_5 RuvB_N AAA_28 AAA_14 NACHT AAA_16 AAA_lid_3 AAA_22 AAA_33 AAA_18 TsaE Acetyltransf_10 TIP49 AAA_25 AAA_17 AAA_2 AAA_24 Acetyltransf_6 AAA_11 AAA_19 RNA_helicase nSTAND3 Cytidylate_kin AAA_30 SKI ABC_tran IPT ATPase DUF5906
Other DBs
NCBI-ProteinID: AOP47848
UniProt: A0A1D7VMV6
LinkDB
Position
complement(4102340..4103629)
AA seq 429 aa
MNWLIHDYREKDLAEVVHLIDSTAELGQESVFSLAECISALTSRQPAVVAVHQGAPIGAA
LACVAGERGWVMRIAISSAWRGRGLASALLVELERRLMAARVSRIAYVLPEEELLGEGLL
NAGYTRQPAVAYFEKVEPHHGPAAGLLEDLGGRFLPADLWSKVAGMEAEKDLIERRVVLP
LAEPERAARHGVRPPRAVALFGPPGTGKTTFARGIAARLGWPFVELLPSRLADEGNLANA
LRSAFARIAELERVLVFIDEVEEIAPVRNEPAQPGGLHGVTNELLKLIPGFRERDERLLV
CATNSIRSLDPAFLRPGRFDYVIPIGTPDPAARSAIWSRYTDGRAEVDVAALVAASELFT
PADIEHAARMAAQASFERDLEAVGVGAGAHGRLGAGTQDYLAALDRCRPTVTPAMIDEFT
ADITAHARC
NT seq 1290 nt   +upstreamnt  +downstreamnt
gtgaactggctcatccacgattaccgcgagaaggatctcgccgaggtggtccacctgatc
gactccacggccgagctcgggcaggagtccgtgttctcgctcgccgagtgcatcagcgcg
ctgacctcccggcagcccgccgtggtggccgtccaccagggggcgcccatcggtgcggcg
ctcgcgtgtgtcgcaggtgagcggggctgggtgatgcggatcgcgatctcctccgcctgg
cgcggccgcgggctggcgagcgccctgctggtggagctggagcggcggctgatggccgcc
cgggtgagccggatcgcctacgtactgcccgaggaggagctgctcggggagggcctgctc
aacgcgggctacacccgtcagcccgcagtggcctacttcgagaaggtcgagccgcaccac
gggcccgcggccggcctcctggaggacctcggcggccggttcctgccggccgacctctgg
tcgaaggtggccggcatggaggcggagaaggacctcatcgagcggcgggtggtgctgccg
ctggcggagccggagcgggcggcccggcacggggtccgaccgccgcgggcggtcgccctg
ttcggcccgccggggaccgggaagaccaccttcgcgcggggcatcgccgcccggctgggc
tggccgttcgtcgagctgctgccgtcccgactggccgacgagggcaatctcgcgaacgcg
ctgcgcagcgcgttcgcccggatcgcggagctggagcgggtgctggtcttcatcgacgag
gtcgaggagatcgcaccggtccgcaacgagccggcgcagcccggcggactgcacggggtg
accaacgagctgctgaagctgataccgggcttccgggagcgcgacgagcggctgctggtg
tgcgccaccaactccatccgctcgctggacccggcgttcctgcggcccggccgcttcgac
tatgtgattccgatcggaacgccggacccggcggcccgctcggcgatctggtcgcggtac
acggacgggcgggccgaggtggatgtcgcggccctggtggcggccagcgagctgttcacc
ccggccgacatcgagcacgccgcgcggatggcggcgcaggcgtcgttcgagcgggatctg
gaggcggtcggggtcggcgcgggtgcccacgggcggctcggtgcgggcacccaggactat
ctcgccgccctcgaccggtgccggccgacggtcaccccggcgatgatcgacgagttcacc
gcggacatcacggcgcacgcccgctgctga

DBGET integrated database retrieval system