Streptomyces lydicus 103: SL103_19510
Help
Entry
SL103_19510 CDS
T04699
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slc03021
]
SL103_19510
Transcription machinery [BR:
slc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SL103_19510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_38
DUF7343
MarR_2
HTH_37
HTH_3
GerE
MarR
Sigma70_ECF
KORA
Annexin_2
Motif
Other DBs
NCBI-ProteinID:
AOP48124
UniProt:
A0A1D7VN08
LinkDB
All DBs
Position
complement(4504483..4505340)
Genome browser
AA seq
285 aa
AA seq
DB search
MTTVVTDTVTAPQAAAPTELPEVRCPSAVAPADARELSKQFFDRLRDLEEGTHAYQYARN
TLIEMNMSMVRYVARRYRNRGDDMEDIVQVGTIGLIKAIDRFDLTREVEFSTFAVPYILG
EIKRFFRDTGWAVHVPRRLQELRSELAKAKEQLHIELDRDPTVRELAAHLNLSEDEVIEG
IVAANGYTAGSLDTPTDPDPSDQGRALADVLGEDDPGMETVEDLHTLAPLLRKLGERERQ
LIELRYGQEMTQSQIGAELGVSQMHVSRLLSRTLAKLRAGMLTER
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgtcgtgaccgacaccgtgaccgcaccgcaggccgcagcaccgacagagctg
ccagaagtacggtgccccagcgcggtggcgccggccgatgcgcgtgagctgtcgaagcag
ttcttcgaccggctgcgggacctcgaagagggcacccacgcgtaccagtacgcgcgcaat
acgctcatcgagatgaacatgtcgatggtccgctacgtggcccgtcgctaccgcaaccgc
ggcgacgacatggaggacatcgtccaggtcggcaccatcggcctgatcaaggccatcgac
cgcttcgacctcacccgcgaggtggagttctccaccttcgccgttccctacatcctcggg
gagatcaagcgcttcttccgggacaccggatgggccgtgcatgtgccccggcgcctccag
gagctgcgcagcgagctggcgaaggccaaggagcagctgcacatcgagctcgaccgcgac
cccaccgtccgtgaactcgccgcccacctgaatctgtcggaggacgaggtcatcgagggc
atcgtcgcggccaacggctacaccgccggctcgctggacacccccaccgaccccgacccc
tccgaccagggccgcgccctcgccgacgtactgggggaggacgatccgggcatggaaacg
gtcgaggacctgcacaccctggcgcccctgctgcgcaagctcggcgagcgggaacgccag
ctgatcgagctgcgctacgggcaggagatgacgcagtcgcagatcggcgcggaactcggc
gtctcccagatgcacgtctcccgcctgctcagccgcaccctcgccaagctccgcgccggc
atgctcaccgaacgctga
DBGET
integrated database retrieval system