KEGG   Streptomyces lydicus 103: SL103_19510
Entry
SL103_19510       CDS       T04699                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
slc  Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:slc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slc03021]
    SL103_19510
Transcription machinery [BR:slc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SL103_19510
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Crp_2 HTH_38 DUF7343 MarR_2 HTH_37 HTH_3 GerE MarR Sigma70_ECF KORA Annexin_2
Other DBs
NCBI-ProteinID: AOP48124
UniProt: A0A1D7VN08
LinkDB
Position
complement(4504483..4505340)
AA seq 285 aa
MTTVVTDTVTAPQAAAPTELPEVRCPSAVAPADARELSKQFFDRLRDLEEGTHAYQYARN
TLIEMNMSMVRYVARRYRNRGDDMEDIVQVGTIGLIKAIDRFDLTREVEFSTFAVPYILG
EIKRFFRDTGWAVHVPRRLQELRSELAKAKEQLHIELDRDPTVRELAAHLNLSEDEVIEG
IVAANGYTAGSLDTPTDPDPSDQGRALADVLGEDDPGMETVEDLHTLAPLLRKLGERERQ
LIELRYGQEMTQSQIGAELGVSQMHVSRLLSRTLAKLRAGMLTER
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaccaccgtcgtgaccgacaccgtgaccgcaccgcaggccgcagcaccgacagagctg
ccagaagtacggtgccccagcgcggtggcgccggccgatgcgcgtgagctgtcgaagcag
ttcttcgaccggctgcgggacctcgaagagggcacccacgcgtaccagtacgcgcgcaat
acgctcatcgagatgaacatgtcgatggtccgctacgtggcccgtcgctaccgcaaccgc
ggcgacgacatggaggacatcgtccaggtcggcaccatcggcctgatcaaggccatcgac
cgcttcgacctcacccgcgaggtggagttctccaccttcgccgttccctacatcctcggg
gagatcaagcgcttcttccgggacaccggatgggccgtgcatgtgccccggcgcctccag
gagctgcgcagcgagctggcgaaggccaaggagcagctgcacatcgagctcgaccgcgac
cccaccgtccgtgaactcgccgcccacctgaatctgtcggaggacgaggtcatcgagggc
atcgtcgcggccaacggctacaccgccggctcgctggacacccccaccgaccccgacccc
tccgaccagggccgcgccctcgccgacgtactgggggaggacgatccgggcatggaaacg
gtcgaggacctgcacaccctggcgcccctgctgcgcaagctcggcgagcgggaacgccag
ctgatcgagctgcgctacgggcaggagatgacgcagtcgcagatcggcgcggaactcggc
gtctcccagatgcacgtctcccgcctgctcagccgcaccctcgccaagctccgcgccggc
atgctcaccgaacgctga

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