Streptomyces lydicus 103: SL103_21000
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Entry
SL103_21000 CDS
T04699
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_21000
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SL103_21000
Archaeal homologous recombinant proteins
SL103_21000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AOP48386
UniProt:
A0A1D7VNP8
LinkDB
All DBs
Position
complement(4825062..4826228)
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AA seq
388 aa
AA seq
DB search
MRFLHTSDWHLGRSFHRVNLLTAQRAFLDHLVETVRAREVDAVLVAGDVYDRAVPPLAAV
ELFDDALHRLAELGVPTVMISGNHDSARRLGVGAGLMERAGIHLRTDPAGCGTPVLLGDA
HGPVAFYGLPYLEPAMVRETLGAQRADHAAVLGAAMDRVRADLADRPAGTRSVVLAHAFV
TGGTASDSERDITVGGVASVPAGVFDGVDYAALGHLHGCQTLSERVRYSGSPLAYSFSEA
DHRKTSWLVELDETGAVHAERVDAPVPRALARIRGPLDRLLDDPALARHEDSWVEATLTD
AVRPHEPMARLVKRYPHILSLVFDPDEGPARSSASYAQRLRGRSDQEIAEDFVAHVRSGR
AADEQERAELRSAIDEVRAEDMAAEVAR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgagatttctgcacacctccgactggcatctcgggcggtccttccaccgcgtgaacctg
ctcaccgcccagcgagccttcctcgatcacctcgtcgagacggtgcgggcccgcgaggtc
gacgcggtgctggtcgcgggcgacgtctacgaccgggccgtaccgccgctcgccgccgtc
gagctcttcgacgacgcgctgcaccggctcgcggagctcggcgtccccaccgtgatgatc
tccggcaaccacgactccgcccgccgcctcggcgtcggcgccgggctgatggagcgggcc
ggcatccatctgcggaccgaccccgccggctgcggcacccccgtactgctcggtgacgcg
cacgggccggtcgcgttctacgggctgccgtacctggagcccgccatggtgcgcgagacc
ctcggggcacaacgggccgatcatgcggcggtgctcggcgcggcgatggaccgggtacgg
gccgacctggccgaccggcccgccgggacgcgctcggtggtgctggcgcacgccttcgtc
accggcggcacggccagcgacagcgagcgcgacatcaccgtcggcggggtcgcctcggtg
cccgcgggcgtcttcgacggggtggactacgccgccctcggccacctgcacggctgccag
accctcagcgagcgggtccgctactccggatcgccgctcgcctactccttctccgaggcc
gaccaccgcaagacgtcgtggctggtggagctggacgagaccggagcggtgcacgcggag
cgggtggacgcgccggtgccgcgggcgctggcccgcatccggggaccgctggaccggctg
ctggacgatccggcgctggcccggcacgaggactcctgggtggaggccacgctcaccgac
gcggtccgcccgcacgaaccgatggcccggctcgtcaagcgctacccgcacatcctcagc
ctggtcttcgaccccgacgagggaccggcccgctcgtcggcctcctacgcccagcggctg
cgcggacgcagcgaccaggagatcgccgaggacttcgtggcacacgtacgctccggccgc
gccgccgatgagcaggagcgggccgaactgcgctcggcgatcgacgaggtgcgcgccgag
gacatggcggcggaggtcgcgcgatga
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