Streptomyces lydicus 103: SL103_24625
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Entry
SL103_24625 CDS
T04699
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SL103_24625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_24625
Enzymes [BR:
slc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SL103_24625
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SL103_24625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOP49007
UniProt:
A0A1D7VQK7
LinkDB
All DBs
Position
complement(5651697..5652476)
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AA seq
259 aa
AA seq
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MRIATWNVNSITARLPRLLAWLESSSTDVLCLQETKCAAEQFPYEQLRELGYEAAVNANG
RWNGVAVLSRVGLDDVVMGLPGGPDYEGLQEPRAVSATCGPARVWSVYVPNGREVDHAHY
TYKLGWFEALKTAVAEDAAGTRPFAVLGDYNVAPTDEDVWDPAVFVGATHVTPAERAALA
ALREAGLSDVVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYGNEPFAKAVSDAYVDRE
ERKGKGASDHAPVVVDLDV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtcaattcgatcactgcccgcctgcccaggctgctggcc
tggctggagagcagcagcaccgacgtgctgtgcctccaggagaccaagtgcgccgccgag
cagttcccgtacgagcagctgcgcgagctcggatacgaggccgcggtgaacgccaacggg
cggtggaacggcgtcgccgtgctgtccagggtgggcctggacgacgtggtcatgggcctg
cccggcggcccggactacgaggggctccaggagccgcgcgcggtctcggcgacctgcggc
ccggcccgcgtctggtcggtgtacgtccccaacggccgggaggtcgaccacgcgcactac
acctacaagctcggctggttcgaggcgctgaagacggcggtcgccgaggacgcggcgggc
acccgcccgttcgcggtcctcggcgactacaacgtcgcccccacggacgaggacgtctgg
gaccccgccgtgttcgtcggcgccacccacgtcacgcccgccgagcgcgccgcgctggcc
gccctgcgggaggccggcctgtcggacgtcgtaccgcgccccctgaagtacgaccggccc
tacacgtactgggactaccgccagctcgcgttcccgaagaaccgcgggatgcgcatcgac
ctggtctacggcaacgaaccgttcgccaaggccgtctccgacgcctatgtggaccgcgag
gagcgcaagggcaagggcgcctcggaccacgccccggtcgtggtggacctcgacgtctga
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