Streptomyces lydicus 103: SL103_25875
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Entry
SL103_25875 CDS
T04699
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc03030
DNA replication
slc03430
Mismatch repair
slc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SL103_25875
03430 Mismatch repair
SL103_25875
03440 Homologous recombination
SL103_25875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slc03032
]
SL103_25875
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_25875
Enzymes [BR:
slc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SL103_25875
DNA replication proteins [BR:
slc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SL103_25875
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SL103_25875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AOP49218
UniProt:
A0A1D7VRU5
LinkDB
All DBs
Position
complement(5945658..5946377)
Genome browser
AA seq
239 aa
AA seq
DB search
MSWHQELLVSFDLETTGTDVEQDRIVTAAVIRLEGDGRAAGQQTWLLDPGVPIPEEAAAI
HGISTAYVQEHGRPPATAIDEITEALAEALRADIPLVVMNARYDLSLLDRECRRHGVRTL
SERLGREPAPVIDPLVLDKHVDRYRKGKRALQALCGHYGVRLEGAHEAGADAAAAAGVAR
RIGAAYPAVAIPSPRALHALQEQAAAEQAASFQAYLRRSGDPEARVEPAWPLIPYQAGS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcatcaggagctgctggtcagtttcgacctggagaccacgggcaccgacgtc
gagcaggaccgcatcgtcaccgccgccgtgatccggctggagggggacggccgggcggcc
gggcagcagacctggctgctggacccaggggtgccgatacccgaggaagctgcggcgatt
cacggcatttcgaccgcatatgtccaggagcacggccgaccgcccgcgacggcgatagac
gagatcaccgaggcgctggccgaggcactgcgcgcggacataccgctggtggtgatgaac
gcccggtacgacctctcgctcctggaccgtgagtgccggcggcacggcgtgcggaccctg
agcgagcggctggggcgggagccggcgccggtcatcgatccgctcgtgctcgacaagcac
gtggaccgctaccgcaagggcaagcgcgcactccaggcgctgtgcggacactacggcgta
cggctggagggcgcccatgaggcgggcgccgacgcggcggccgcggccggtgtcgcccgg
cggatcggggccgcgtaccccgcggtcgcgattccctccccccgcgccctgcacgccctg
caggagcaggcggccgccgaacaagccgcttcgttccaggcgtatttgcggcgctccggg
gacccggaggcgagagtcgagccggcctggccgctgattccgtaccaggccggatcctga
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