Streptomyces lydicus 103: SL103_26160
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Entry
SL103_26160 CDS
T04699
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slc03016
]
SL103_26160
Enzymes [BR:
slc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SL103_26160
Transfer RNA biogenesis [BR:
slc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SL103_26160
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOP49264
UniProt:
A0A1D7VRC3
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Position
6014472..6015635
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AA seq
387 aa
AA seq
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MTATEEALAEVVAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPD
LSALGEAIGDAEWVLHAATQDLPCLRDIGMVPSRLFDTELAGRLAGFARVGLGAMVENVL
GFALEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEEELEQQGKLEWARQEFAAI
AAAPPAPPRKDPWRRTSGMHKVRRRRQMAVVRELWTARDQVAQRRDVSPGKVLSDSAIVE
AALHLPPNSHALAGLPGFGHRMGRRQLEQWQAAVDRARELSESELPQPGQPLNGPPPPRS
WADKDPAAAARLSAARASVTALAERLNLPQENLITPDTVRRLCWEPPAAPTEESVAAILA
GHGARRWQIEQVAPLLTEALRADPDAD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccacggaagaggcgctcgccgaggtcgtggccgcgttcgcggccggtacgggc
ccggtggccgtcgacgccgagcgcgcctcgggctaccgctacgggcagcgcgcctacctc
gtccagctgcgccgggaaggcgccggcagcgccctgatcgacccggtcggctgccccgac
ctgtcggcgctgggcgaggcgatcggcgacgccgagtgggtgctgcacgccgccacccag
gacctgccgtgtctgcgtgacatagggatggtccccagccggctcttcgacaccgagctg
gccggccggctggccggcttcgcccgggtgggcctcggcgcgatggtcgagaacgtcctc
ggcttcgccctggagaagggccactccgccgtcgactggtccacccgcccgctgcccgag
ccctggctgcgctatgccgcgctcgacgtcgagctgctggtggacctccgcgacgcgctg
gaggaggagctggaacagcaggggaagctggagtgggcccggcaggagttcgcggcgatc
gccgccgctcccccggcgccgccccggaaggacccctggcgccgtacgtccggcatgcac
aaggtccgccggcgccgccagatggccgtcgtacgggagttgtggacggcccgcgaccag
gtggcccagcggcgcgacgtctcgcccggcaaggtgctcagcgactccgcgatcgtggag
gcggcgctgcacctgccgccgaacagccacgccctcgccggactgcccggcttcggccat
cgcatgggccgtcgccagctggagcagtggcaggccgccgtcgaccgcgcccgcgagctg
tccgagagcgagctgccgcagcccggtcagccgctcaacggcccgccgccgccccgctcc
tgggccgacaaggacccggccgccgcggcccggctgtcggccgcccgcgcgtcggtcacc
gcgctcgccgagcggctgaacctcccgcaggagaacttgatcaccccggacaccgtgcgc
cggctgtgctgggagccgccggccgcgccgaccgaggagtcggtcgccgcgatcctggcc
ggccacggcgcccgccgctggcagatcgagcaggtcgccccgctcctcaccgaggccctg
cgcgcggacccggacgccgactga
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