KEGG   Streptomyces lydicus 103: SL103_26160
Entry
SL103_26160       CDS       T04699                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
slc  Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:slc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slc03016]
    SL103_26160
Enzymes [BR:slc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SL103_26160
Transfer RNA biogenesis [BR:slc03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SL103_26160
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: AOP49264
UniProt: A0A1D7VRC3
LinkDB
Position
6014472..6015635
AA seq 387 aa
MTATEEALAEVVAAFAAGTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPD
LSALGEAIGDAEWVLHAATQDLPCLRDIGMVPSRLFDTELAGRLAGFARVGLGAMVENVL
GFALEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEEELEQQGKLEWARQEFAAI
AAAPPAPPRKDPWRRTSGMHKVRRRRQMAVVRELWTARDQVAQRRDVSPGKVLSDSAIVE
AALHLPPNSHALAGLPGFGHRMGRRQLEQWQAAVDRARELSESELPQPGQPLNGPPPPRS
WADKDPAAAARLSAARASVTALAERLNLPQENLITPDTVRRLCWEPPAAPTEESVAAILA
GHGARRWQIEQVAPLLTEALRADPDAD
NT seq 1164 nt   +upstreamnt  +downstreamnt
gtgaccgccacggaagaggcgctcgccgaggtcgtggccgcgttcgcggccggtacgggc
ccggtggccgtcgacgccgagcgcgcctcgggctaccgctacgggcagcgcgcctacctc
gtccagctgcgccgggaaggcgccggcagcgccctgatcgacccggtcggctgccccgac
ctgtcggcgctgggcgaggcgatcggcgacgccgagtgggtgctgcacgccgccacccag
gacctgccgtgtctgcgtgacatagggatggtccccagccggctcttcgacaccgagctg
gccggccggctggccggcttcgcccgggtgggcctcggcgcgatggtcgagaacgtcctc
ggcttcgccctggagaagggccactccgccgtcgactggtccacccgcccgctgcccgag
ccctggctgcgctatgccgcgctcgacgtcgagctgctggtggacctccgcgacgcgctg
gaggaggagctggaacagcaggggaagctggagtgggcccggcaggagttcgcggcgatc
gccgccgctcccccggcgccgccccggaaggacccctggcgccgtacgtccggcatgcac
aaggtccgccggcgccgccagatggccgtcgtacgggagttgtggacggcccgcgaccag
gtggcccagcggcgcgacgtctcgcccggcaaggtgctcagcgactccgcgatcgtggag
gcggcgctgcacctgccgccgaacagccacgccctcgccggactgcccggcttcggccat
cgcatgggccgtcgccagctggagcagtggcaggccgccgtcgaccgcgcccgcgagctg
tccgagagcgagctgccgcagcccggtcagccgctcaacggcccgccgccgccccgctcc
tgggccgacaaggacccggccgccgcggcccggctgtcggccgcccgcgcgtcggtcacc
gcgctcgccgagcggctgaacctcccgcaggagaacttgatcaccccggacaccgtgcgc
cggctgtgctgggagccgccggccgcgccgaccgaggagtcggtcgccgcgatcctggcc
ggccacggcgcccgccgctggcagatcgagcaggtcgccccgctcctcaccgaggccctg
cgcgcggacccggacgccgactga

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