Streptomyces lydicus 103: SL103_27300 Help Entry SL103_27300       CDS       T04699                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism slc  Streptomyces lydicus 103 Brite KEGG Orthology (KO) [BR:slc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:slc03400]     SL103_27300 Enzymes [BR:slc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      SL103_27300     5.6.2.6  RNA 3'-5' helicase      SL103_27300 DNA repair and recombination proteins [BR:slc03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     SL103_27300 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 DUF6406 AbiEi_4 PhoH Motif Other DBs NCBI-ProteinID:  AOP51528 UniProt:  A0A1D7VYG8 LinkDB All DBs Position 6300810..6305582 Genome browser AA seq 1590 aa AA seqDB search MAKAALDSFSPATRGWFAGAFSAPTAAQEGAWQAIGAGSDVLVVAPTGSGKTLAAFLASL DALASTPPPADPKKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRRGLPEPEITVGI RSGDTPPAERRAIANRPPDILITTPESLFLMLTSSAREALAGVETVILDEVHAVAGTKRG AHLALSLERLDELLERPARRIGLSATVRPVEEVARYLSPRRRVEIVQPPSGKRFDLSVVV PVEDMGELGGAPAQEGESGEKPSIWPQVEERIADLVQAHRSTIVFANSRRLAERLCNRLN EIAYERATGEALPEHHSPAELMAEAGAAKGAPPLLARAHHGSVSKEQRAQVEEDLKAGRL PAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGIVFPKYRGDL VQAAVVTERMRSGAIEALRVPANPLDVLAQQLVAMAAMDTWDVEELLTVVRRAAPFAALP ESAYTAVLDMLAGRYPSDAFAELRPRLVWDRVAQTVTGRPGAQRLAVTSGGTIPDRGLFG VFLAGGDGKGGGRRVGELDEEMVYESRVGDVFTLGTTSWRIEDITRDRVLVTPAPGVPGR LPFWKGDQLGRPLELGRALGAFLREIGSLAPEDAGARLAAAGLDDWAVSNVLSYLAEQRQ SCGHVPDDRTIVVERFRDELGDWRVVIHSPFGAQVHAPWALALGARLAERYGMDAQVMHA DDGIVLRLPDADLMGLDLLDGDGGFDPSTDPGLAARGTEYDPEQSPVGAADVAFDQGEID QVVTDQVGGSALFASRFRECAARALLLPRRNPGKRTPLWQQRQRAAQLLQVASEFGSFPI VLEAVRECLQDVFDVPGLTELMGDIEARRVRLVEVTTPEPSPFARSLLFGYVAQFLYEGD SPLAERRAAALSLDSRLLAELLGQAELRELLDAEVLTELERELQWRTDDRRVKDVEGVAD VLRLLGPLTDAELVERGADPAWAGELAAARRAISVRIAGAEHWAAIEDAGRLRDALGTAL PVGVPESFTEPVKDPLGDLLSRYARTHGPFTSEQAAARFGLGTAVTDGALHHLAAAGRVV QGEFHPAGIGQEWCDAQVLRRLRRRSLAALREELEPVPPASLAAFLPQWQHVGPPRPATV SGTPAPLAGASHSLRGIDGLVRAIEQLQGAPVPASALEKLVLPSRVGGYTPALLDELTAT GEVLWAGAGALPGKDGWLSLHLADAAPLLLPPPLPLELSAVHESLLAALSPGYGLFFRQL ADQVRATTHPEATDVQLADALWDLAWSGRLTNDTLAPLRALLGSGRTAGSTAHRARRAVP RGRWAHGGGALTAGRVGRPTASRSGPPTVGGRWSLLPHPETDATHRAHALARALLDRHGI VTRGAVSAEGVEGGFSAAYRVLAAFEESGQARRGYVVEGLGAAQFAMDGAVDRLRAVSTQ RERTAGDTLPDGDPGQARRGGPQRAVVLAAADPANAYGAALSWPDPPEGSTHKPGRKAGS LVVLVDGELTLYMERGGKTLLIWPLGHDQAPTDPRVQLAVEALIDAARAGALGTVTTERI NGTAALTSPFSATLESAGFHPTPRGLRLRG NT seq 4773 nt NT seq  +upstreamnt  +downstreamnt atggccaaggcagcgctcgattcgttctcccccgcgacccgcggatggttcgccggggcg ttcagcgcgcccaccgcggcgcaggagggcgcctggcaggcgatcggggcgggttcggac gtcctggtggtggcgccgacgggctccgggaagaccctcgccgcgttcctcgcgtcgctg gacgcgctggcgagcaccccgccgccggcggacccgaagaagcgctgccgggtgctgtac gtctcgccgctgaaggcgctggccgtcgatgtggagcgcaatctgcgcagcccgctgacg ggcatccgccaggagtcggtccgtcgcgggctgccggagccggagatcacggtcggcatc cgttccggcgacaccccgcccgccgagcggcgggcgatcgccaatcgcccgccggacatc ctcatcacgacccccgagtcgctgttcctgatgctgacgtcctcggcccgggaggcgctg gccggtgtcgagacggtgatcctggacgaggtccatgccgtcgccggcacgaagcgcggc gcgcatctggcgctgtccctggagcggttggacgagctgctggaacgtccggcgcgccgg atcgggctgtcggcgacggtgcgcccggtggaggaggtggcccgctatctgtcgccgcgg cgtcgggtggagatcgtgcagccgccgtcggggaagcgcttcgacctctcggtggtcgtc ccggtggaggacatgggcgagttgggcggcgcaccggcccaggagggcgagagcggcgag aagccgtccatctggccacaggtcgaggagcggatcgccgatctcgtccaggcccatcgc tccacgatcgtcttcgccaactcccgccggctggcggagcggctgtgcaaccgcctcaac gaaatcgcctacgagcgggccacgggcgaggccctgcccgagcaccactcccccgcggag ctgatggccgaggccggtgccgccaagggggcgccgccgctgctggcccgtgcgcaccac ggctcggtgtccaaggagcagcgcgcccaggtcgaggaggacctgaaggcgggccggctg ccggcggtggtcgccacgtccagcctggagctgggcatcgacatgggcgcggtggatctg gtcgtccaggtggagtcgcccccgtcggtcgcctccggtctgcaacgggtcggccgggcc gggcaccaggtcggcgcggtctcgacgggcatcgtcttccccaagtaccgcggggatctg gtgcaggcggccgtggtcaccgagcggatgcgctcgggcgccatcgaggcgctgcgggtg cctgccaatccgctggacgtcctcgcccagcagctcgtcgccatggccgcgatggacacc tgggacgtggaggagctgctgaccgtcgtacggcgggccgccccgttcgccgcgctcccc gagtcggcgtacacggccgtgctggacatgctcgccggccgctacccgtcggacgccttc gccgagctgcgcccgcgcctggtgtgggaccgcgtcgcacagaccgtcaccggccgtccc ggggctcagcggctggccgtcacctccggcggcacgatccccgaccgcggcctgttcggg gtgttcctggcgggcggcgacggcaagggcggcggccgccgggtgggcgagctcgacgag gagatggtctacgagtcccgcgtcggcgatgtcttcacgctcggcacgacgtcctggcgc atcgaggacatcacccgggaccgggtcctggtcacgcccgcccccggggtgccgggccgg ctgcccttctggaagggcgaccagctcggccgccccctcgaactgggccgtgcgctgggc gcgttcctccgcgagatcggctcgctggcccccgaggacgccggcgcccggctggccgcc gccgggctggacgactgggcggtctccaacgtcctgagctacctcgccgagcagaggcag tcctgcggccacgtccccgacgaccgcacgatcgtcgtcgagcggttccgcgacgagctg ggcgactggcgggtggtcatccactcccccttcggggcacaggtccacgccccctgggcc ctggccctcggcgcccgtctcgccgagcgctacggcatggacgcccaggtgatgcacgcc gacgacggcatcgtgctgcggctgccggacgccgacctcatggggctcgatctgctggac ggggacggcgggttcgatccgtccaccgacccgggtctcgccgcccgcggcacggagtac gaccccgagcagtcccccgtgggggccgccgatgtggccttcgaccagggtgagatcgac caggtcgtcacggaccaggtgggcgggtccgcgctgttcgcctcccggttccgggagtgc gcggcgcgcgccctgctgctgccgcggcgcaaccccggcaagcgcaccccgctgtggcag cagcgccagcgcgccgcccagctcctccaggtggccagtgagttcggctccttcccgatc gtgctggaggccgtccgcgagtgcctgcaggacgtcttcgacgtaccgggcctgacggag ctgatgggcgacatcgaggcacgccgggtgcgcctggtggaggtcaccacccccgaaccg tcgccgttcgcgcgctcgctgctgttcggctacgtcgcccagttcctctacgagggcgac tccccgctcgccgagcgccgcgcggccgcgctgtccctggattcccggctgctggccgag ctgctgggccaggcggagctgcgcgagctgctggacgccgaggtgctcacggagctggag cgcgagctccagtggcgcacggacgaccggcgggtcaaggacgtcgagggcgtcgcggac gtcctgcggctgctgggcccgctgaccgacgccgagctggtcgagcgcggcgcggatccg gcctgggccggggagctggccgccgcccgccgcgccatttcggtgcggatcgccggcgcc gagcactgggccgcaatcgaggacgccggccggctccgcgacgccctgggcacggcgctg ccggtcggcgtcccggagtcgttcacggagccggtcaaggacccgctgggcgatctgctg tcccggtatgcccgtacgcacggtccgttcacctccgagcaggcggccgcccgcttcggc ctcggcacggccgtcaccgacggcgcgctgcaccacctcgcggccgccggccgggtcgtc cagggcgagttccaccccgcgggcatcggccaggagtggtgcgacgcccaggtgctgcgc aggctgcggcggcgttcgctggccgcgctgcgcgaggagctggagccggtgccgccggcc tcgctcgccgccttcctcccccagtggcagcatgtcggcccgccgcgtccggccaccgtg agcgggacaccggcgccgctcgccggcgcctcgcacagcctgcgcggtatcgacggactg gtgcgcgccatcgagcagttgcagggcgcgccggtgccggcctccgcgctggagaagctg gtgctgccgtcccgcgtcggcggctacacccccgccctgctggacgaactgaccgccacc ggggaggtgttgtgggccggcgcgggcgccctccccggcaaggacggctggctctccctg catctcgccgacgccgccccgctgctgctccccccaccgctcccgctggaactgtccgcg gtgcacgagtcgctgctggccgcgctctcccccgggtacggcctgttcttccgccagctc gccgaccaggtccgcgccaccacccaccccgaggccaccgacgtccaactggccgacgcg ctgtgggacctggcctggtcggggcggctgaccaacgacaccctcgccccgctgcgcgcc ctcctcggctcgggccgtacggcgggctcgaccgcgcatcgcgcccggcgtgcggtcccg cgcggcagatgggcgcacgggggaggcgcgctgaccgcggggcgcgtcggccgcccgacc gcctcccgctccggcccgccgaccgtcgggggccgctggtcgctgctgccgcaccccgag accgacgccacgcaccgcgcccatgccctggcccgcgcgctcctcgaccggcacggcatc gtcacccgcggcgcggtgtccgccgagggggtcgagggcgggttctccgccgcgtaccgg gtgctcgcggcgttcgaggagtccgggcaggcccgccgcggctacgtcgtcgaggggctg ggcgccgcccagttcgccatggacggtgcggtggaccggctgcgtgcggtcagcacccaa cgggagcgcaccgcgggcgacaccctgccggacggcgacccggggcaggcgcggcgcggc ggtccgcagcgcgcggtcgtgctggccgccgccgacccggccaacgcctacggtgccgcc ctctcctggcccgacccgcccgagggctcgacccacaagccgggccgcaaggccggctcc ctggtcgtcctggtggacggcgagctgacgctctacatggagcgcggcggcaagaccctg ctcatctggcccctcggccatgatcaggcgcccaccgacccccgcgtccagctcgccgtc gaggccctcatcgacgccgcccgggccggcgctctcggcaccgtcaccaccgagcgcatc aacggcacagcggccctgacgtccccgttctccgccaccctggagtccgccggcttccac ccgaccccccgtgggctgcgcctgcgcggataa

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