Streptomyces lydicus 103: SL103_27550
Help
Entry
SL103_27550 CDS
T04699
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slc03016
]
SL103_27550
Enzymes [BR:
slc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SL103_27550
Transfer RNA biogenesis [BR:
slc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SL103_27550
Prokaryotic type
SL103_27550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AOP49498
UniProt:
A0A1D7VSM0
LinkDB
All DBs
Position
complement(6375300..6376229)
Genome browser
AA seq
309 aa
AA seq
DB search
MKRESNKPGGLIIVDKPSGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGLERAT
KLLGHLALTEKEYVGTIRLGQTTITDDAEGDITASKAAHGIAREDIDAGVAQLSGAIMQV
PSKVSAIKIDGKRSYSRVRDGEDVEIPARPVTISSFVVHSAHEAEAEDGTPVTDLLVSVE
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDRARTLEQLQAAVDDPEGGGLPI
MPVGEAAEAAFTRWNVTEAQARLLLNGARIAMPRFEGDGPVAAFGPDGRFLALVENQGGK
AKSLAVFAV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgagagcaacaagccgggcggcctgatcatcgtcgacaagccgtccggcttc
acttcgcacgacgtggtggcgaagatgcgcggcatggcccgcacccgccgggtcggccac
gccggcaccctcgacccgatggccacgggcgtcctcgtcctcggcctggaacgggccacg
aagctgctcggccacctcgcactgaccgagaaggaatacgtcggcacgatccggctcggg
cagaccacgatcaccgacgacgccgagggcgacatcacggcgtccaaggcggcgcacggc
atcgcccgcgaggacatcgacgccggcgtcgcgcagctgtccggcgcgatcatgcaggtc
ccgtcgaaggtcagcgccatcaagatcgacggcaagcggtcctactcccgggtccgcgac
ggcgaggacgtggagatcccggcccgtccggtgaccatctcctcgttcgtcgtgcactcc
gcgcacgaggccgaggcggaggacggcaccccggtgaccgacctgctcgtctccgtcgag
tgctcgtccggtacgtacatccgcgcccttgcccgcgacctgggcgccgggctcggcgtg
ggcggccacctgaccgcgctgcgccgcacccgcgtcggcccgtacaagctggaccgggcg
cgcacgctggagcagctgcaggccgcggtggacgaccccgagggcggcggcctgccgatc
atgcccgtcggggaggcggccgaggcggccttcacccgctggaacgtcaccgaggcacag
gcccggctgctgctgaacggcgcgcggatcgccatgccgcgcttcgagggcgacggcccg
gtcgccgccttcgggccggacggccgtttcctggcgctggtggagaatcagggcggcaag
gcgaagagcctggcggtcttcgccgtctag
DBGET
integrated database retrieval system
