Streptomyces lydicus 103: SL103_28565
Help
Entry
SL103_28565 CDS
T04699
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc00260
Glycine, serine and threonine metabolism
slc00460
Cyanoamino acid metabolism
slc00630
Glyoxylate and dicarboxylate metabolism
slc00670
One carbon pool by folate
slc00680
Methane metabolism
slc01100
Metabolic pathways
slc01110
Biosynthesis of secondary metabolites
slc01120
Microbial metabolism in diverse environments
slc01200
Carbon metabolism
slc01230
Biosynthesis of amino acids
slc01240
Biosynthesis of cofactors
slc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SL103_28565
09102 Energy metabolism
00680 Methane metabolism
SL103_28565
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SL103_28565
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SL103_28565
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SL103_28565
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SL103_28565
Enzymes [BR:
slc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SL103_28565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Met_gamma_lyase
Lactamase_B_3
SelA
Motif
Other DBs
NCBI-ProteinID:
AOP49672
UniProt:
A0A1D7VSC3
LinkDB
All DBs
Position
6605143..6606399
Genome browser
AA seq
418 aa
AA seq
DB search
MSILNSSLHELDPDVAAAVDAELHRQQSTLEMIASENFAPAAVMEAQGSVLTNKYAEGYP
GRRYYGGCEHVDVVEQIAIDRIKALFGAEAANVQPHSGAQANAAAMFALLKPGDTIMGLN
LAHGGHLTHGMKINFSGKLYNVVPYHVGEDGLVDMDEVERLAKETQPKLIVAGWSAYPRQ
LDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPNPVPHAHVVTTTTHKTLGGPRGGVIL
STQELAKKINSAVFPGQQGGPLEHVIAAKAVSFKVAASDDFKERQERTLEGAKILAERLT
REDAKAVGVDVLTGGTDVHLVLVDLRNSDLDGQQAEDRLHEVGITVNRNAIPNDPRPPMV
TSGLRIGTPALATRGFRAEDFREVADIIAEALKPSYDAEALKARVTALAEKFPLYPSL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctcaacagctccctgcacgagctggaccccgatgtcgccgccgccgtggac
gccgagctgcaccgccagcagtccaccctcgagatgatcgcctcggagaacttcgccccc
gccgccgtcatggaggctcaggggtcggtcctgaccaacaagtacgccgagggctacccc
ggccgccgctactacggcggctgcgagcacgtcgacgtcgtcgagcagatcgccatcgac
cggatcaaggccctcttcggggccgaggccgcgaacgtccagccgcactccggtgcccag
gccaacgccgccgccatgttcgccctgctcaagccgggcgacacgatcatgggcctcaac
ctcgcccacggcggccacctgacccacggcatgaagatcaacttctccggcaagctctac
aacgtggtgccctaccacgtcggtgaggacggcctggtcgacatggacgaggtcgagcgc
ctcgccaaggagacccagccgaagctgatcgtcgccggctggtccgcctacccccgccag
ctcgacttcgccgccttccgccgcatcgcggacgaggtcggcgcctacctcatggtcgac
atggcccacttcgccggcctcgtcgccgcgggcctgcaccccaacccggtgccgcacgcc
cacgtcgtcaccaccaccacccacaagaccctcggtggtccccgcggcggcgtgatcctg
tccacccaggagctcgccaagaagatcaactccgcggtcttccccggccagcagggcggc
ccgctcgaacacgtcatcgccgccaaggccgtctccttcaaggtcgccgcctccgacgac
ttcaaggagcgccaggagcgcaccctcgaaggcgccaagatcctcgccgagcgcctcacc
cgtgaggacgccaaggccgtcggcgtcgacgtcctgaccggcggcaccgacgtccacctc
gtcctggtcgacctgcgcaacagcgacctcgacggccagcaggccgaggaccgcctgcac
gaggtcggcatcaccgtcaaccgcaacgcgatccccaacgacccccgcccgccgatggtc
acctccggcctgcgcatcggcaccccggccctggccacccgcggcttccgggccgaggac
ttccgcgaggtcgccgacatcatcgcggaggcgctcaagcccagctacgacgccgaagcc
ctcaaggcccgcgtcaccgccctcgccgagaagttcccgctctacccgtccctgtga
DBGET
integrated database retrieval system