Streptomyces lydicus 103: SL103_29925
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Entry
SL103_29925 CDS
T04699
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc03420
Nucleotide excision repair
slc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SL103_29925
03430 Mismatch repair
SL103_29925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slc03400
]
SL103_29925
Enzymes [BR:
slc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SL103_29925
DNA repair and recombination proteins [BR:
slc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SL103_29925
MMR (mismatch excision repair)
Other MMR factors
SL103_29925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
ParB_C
Motif
Other DBs
NCBI-ProteinID:
AOP49904
UniProt:
A0A1D7VT75
LinkDB
All DBs
Position
complement(6909064..6912924)
Genome browser
AA seq
1286 aa
AA seq
DB search
MSARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRAALLAAGVTDPDASPADGDPAADQPPGEPRISTYHA
FAGQLLKDHGLRIGLEPSARLLADATRFQLAARTLRTAPGPYPSLTTSLPSLVEDLLALD
AELAEHLVDPAELRAHDTALLAALDGVKLTNADLRKVPDTARGRLELLDLVTAYRSEKRH
RDLLDFGDQIAHSATLATTRPETGRILRDEFRVVLLDEYQDTSVAQRLLLSGLFGAGTGG
APTGHAVTAVGDPCQAIYGWRGASVANLDDFPQHFPFRDGTPARRFALSENRRSGGRLLD
LANGLAAPLRAMHEGVEALRPAPGAERDGIVRCALLPTHAEEIDWLADSLAHLVRTGTPP
GEIAVLCRTAADFARIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQDPTANASL
VRLLIGPRWRIGPRDLALLGRRARTLVHRTGPSDDPATRLAEAVEGVDPAETVSLADALD
TFLEAEGPDDGLPFSAEARVRFAYLATELRELRRSLADPLMDVLHRILATTGLEVELSAS
PHALAARRRETLGTFLDIAAGFAAKQGGEALDGEATLLAFLGFLRTAVQYEKGLDSSLPG
GDNTVKVLTAHKSKGLEWDVVAVPGLVSKQFPSEQARESWISRARVLPHSLRGDAATLPD
VDEWAARGLKSFKEAMKHHQETEELRLGYVTFTRPRSLLLGSGHWWGPNQKRPRGPSAFL
EALRAHCEAGHGEIEHWAAAPEDGAENPALTEAAADQVWPLPLDPTATDRRRAAAATVRA
HLARRLATTMADTGSGPGAPSGSGTASGNGTGAVPPQPPAHDPEWPPPPADEEWEPWEDE
PYDHPEALDGAPEALPEDDPFASSDPSDPFDPAAPFGPSDLFDAAAAHAPARADHDPAHG
PAPAYDHPTQDEDRPATGTAPHPARIIAQRSTEPDLTPPARSAPRDAADPATTAAPDDPT
APHPDDTDRGPHTLLPEERRTIGSWDRDLDALTAELRRSRATVRDVPLPAALSATQLLHL
AADPDGFARELARPMPRPPRPGARRGIRFHAWVESRFEELTLPLLGPDELPGADEADEAD
IADESDLEALKEAFARTPYAHRTPFRVEAPFQLTLAGRLIRGRIDAVYKEPGPDGDRFEI
IDWKTGRAHPHSRTGTGGAPTADPLQLAVYRLAWAERYGLPPSAVGAAFVHVRSGEVIRP
RHLPGRAGLERILLGETADRPPPKGR
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagcccgcatcaccgaccccgagcagctcaaggagctcctcgggatcccgttcacc
ccggagcagacggcgtgcatcaccgccccgcccgccccgcaggtcatcgtggccggagcc
ggctccgggaagaccaccgtcatggccgcccgggtggtgtggctggtgggcaccggccag
gtcgcccccgagcaggtcctcgggctgacgttcacgaacaaggccgccggcgaactcgcc
gaacgcgtccgggccgccctgctggccgccggcgtcaccgaccccgacgcctccccggcc
gacggcgacccggcagccgaccagccccccggagaaccacggatctccacctaccacgcc
ttcgccggccagctcctcaaggaccacggcctgcgcatcgggctggaacccagtgcccgg
ctgctggccgacgccacccgcttccagctcgccgcccgcaccctgcgcaccgcccccggc
ccctacccctcgctcaccacctccctgccctccctcgtggaggacctcctcgccctcgac
gccgaactcgccgagcacctcgtcgaccccgccgagctccgcgcccacgacaccgcgctg
ctcgccgccctcgacggcgtcaaactcaccaacgccgacctgcgcaaggtccccgacacc
gcccgcggccgcctggaactcctcgacctcgtcaccgcctaccgcagcgagaagcgccac
cgcgacctgctcgacttcggcgaccagatcgcccactccgcgaccctcgccaccacccgc
ccggaaaccggccgcatcctgcgcgacgaattccgcgtcgtcctgctcgacgagtaccag
gacacctccgtcgcccagcggctgctgctctccggcctcttcggcgccggcaccggcggc
gccccgaccggccacgccgtcaccgccgtcggcgacccctgccaggccatctacggctgg
cgcggcgcctccgtcgccaacctcgacgacttcccccagcacttccccttccgggacggc
acccccgcccgccgcttcgccctcagcgagaaccgccgcagcggcggccgcctcctcgac
ctcgccaacggcctcgccgcccccctccgcgccatgcacgaaggcgtcgaagccctgcgc
cccgcccccggcgccgaacgcgacggcatcgtgcgctgcgccctgctgcccacccacgcc
gaagagatcgactggctcgccgactccctcgcccacctcgtccgcaccggcaccccgccc
ggcgagatcgccgtcctgtgccgcaccgccgcggacttcgcccgcatccagggcgccctc
gtcgcccgggacgtccccgtcgaggtcgtcggcctctccgggctgctgcacctccccgag
atcgccgacctcgtcgccgtctgcgaagtcctccaggaccccaccgccaacgcctccctg
gtccgcctgctgatcggcccgcgctggcgcatcggcccccgcgacctcgccctcctcggc
cgccgcgcccgcaccctcgtccaccgcaccggcccctccgacgaccccgccacccgcctc
gccgaagccgtcgaaggcgtcgacccggcggagaccgtctccctcgccgacgccctcgac
accttcctcgaagccgaaggccccgacgacgggctgccgttctctgccgaggcccgggtg
cgcttcgcctacctcgccaccgaactccgcgagctgcggcgctccctcgccgaccccctc
atggacgtcctccaccggatcctggccaccaccggcctggaggtcgaactgtccgcctcc
ccgcacgccctcgccgcccgccgccgcgaaaccctcggcaccttcctcgacatcgccgcc
ggcttcgccgccaaacagggcggcgaagccctcgacggcgaggccaccctcctcgccttc
ctcggcttcctgcgcaccgccgtccagtacgaaaagggactcgacagctccctccccggc
ggcgacaacaccgtcaaggtcctcaccgcccacaagtccaagggcctggaatgggacgtc
gtcgccgtccccggcctggtcagcaagcagttccccagcgaacaggcccgcgagtcctgg
atcagccgcgcccgcgtcctgccgcactccctgcgcggcgacgccgcgaccctccccgac
gtcgacgaatgggccgcccgcggcctgaagtccttcaaggaggcgatgaagcaccaccag
gaaaccgaggagctccgcctcggctacgtcaccttcacccgcccccgcagcctgctgctc
ggctccggccactggtggggccccaaccagaagcgcccccgcggcccgtccgccttcctg
gaggcgctgcgcgcgcactgcgaggcgggccacggcgagatcgagcactgggccgccgcc
cccgaggacggcgccgagaaccccgccctcaccgaggccgccgccgaccaggtctggccg
ctgcccctcgaccccaccgcgacggaccgccgccgcgccgcagccgccacggtccgcgcc
cacctggcccgccgcctcgccacgaccatggccgacaccggctccggccccggcgccccc
tccggctccggcaccgcttcgggcaacggcaccggagccgtcccgccgcagccccccgcg
cacgaccccgagtggccaccgccgcccgccgacgaggagtgggagccgtgggaggacgag
ccgtacgaccaccccgaagccctcgacggcgctcccgaggccctccccgaggacgacccg
ttcgcctcctcagacccctcggaccccttcgatcccgccgcccccttcggcccgtccgac
ctcttcgacgccgccgccgcgcacgcacccgcccgggcggaccacgacccggcgcacggg
cccgcacccgcgtacgaccacccgacccaggacgaggaccgccccgcgaccggcaccgcc
ccgcaccccgcccggatcatcgcccagcgctccaccgaacccgacctcacaccacccgcc
cgcagcgcaccccgcgacgccgccgaccccgcgaccaccgccgccccggacgaccccacc
gccccgcaccccgacgacaccgaccgcggcccgcacaccctcctccccgaggagcgccgc
accatcggctcctgggaccgcgacctcgacgccctcaccgccgagctgcgccgctcccgc
gccaccgtccgcgacgtcccgctgcccgccgccctcagcgccacccaactgctgcacctc
gccgccgaccccgacggcttcgcccgcgaactcgcccgccccatgccgcgcccgccccgc
cccggcgcccgccggggcatccgcttccacgcctgggtcgaatcccgcttcgaagaactg
accctgccgctgctcggccccgacgaactccccggcgccgacgaggccgacgaagcagac
atcgccgatgaaagcgacctcgaagccctcaaggaagccttcgcccgcaccccctacgcc
caccgcacccccttccgcgtcgaagcccccttccagctgacgctcgccggacgactgatc
cgcggccgcatcgacgccgtctacaaggagcccggccccgacggcgaccgcttcgagatc
atcgactggaagaccggccgcgcccacccccacagccgcacgggcacgggaggcgccccc
accgccgaccccctccagctcgccgtctaccgcctcgcctgggccgagcgctacggcctg
cccccctccgccgtgggcgccgccttcgtccacgtacgcagcggcgaggtcatccggccc
cggcacctgcccggccgcgccggactggagcgcatcctgctcggcgagaccgccgaccgt
ccccctccgaaaggccgatag
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