Streptomyces lydicus 103: SL103_32600
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Entry
SL103_32600 CDS
T04699
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc00190
Oxidative phosphorylation
slc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SL103_32600
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SL103_32600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slc03019
]
SL103_32600
Enzymes [BR:
slc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
SL103_32600
Messenger RNA biogenesis [BR:
slc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SL103_32600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AOP50374
UniProt:
A0A1D7VUJ4
LinkDB
All DBs
Position
complement(7521232..7523514)
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AA seq
760 aa
AA seq
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MNQQPSAQAQAQPETPTPKPPQAPAPSAQPSVGSIAAHRPHAVRGTVPGLEPDLDADPDA
YEDRGVVGADGEELPGDRFLDRERSWLGFNERVLELAEDPATPLLERANFLAIFASNLDE
FFMVRVAGLKRRIATGVATRSASGLQPREVLDQIWTRSRELMARHAACFQQDIAPELADQ
GIHLIRWPELTEKEQARLFTLFRQQIFPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVS
GHDHFARVKVPPLLSRFLEASPQRYVPIEDVIAAHLEELFPGMEVRAHHMFRVTRNEDLE
VEEDDAENLLQALEKELMRRRFGPPVRLEVEESIDPAVLDLLVQELKISDAEVYPLPGPL
DLTGLFGIGALDRPELKFPKFVAGTHRDLAEVESASAPDIFAALRARDVLLHHPYDSFST
SVQAFLEQAAADPDVLAIKQTLYRTSGDSPIVDALIDAAESGKQVLVLVEIKARFDEQAN
IKWARKLEEAGCHVVYGLVGLKTHCKLSLVVRQEGDMLRRYSHVGTGNYHPKTARLYEDL
GLLTADPQVGADLSDLFNRLSGYSRRETYRRLLVAPKSLRDGLVQRINKEIANQRAGRPA
YVRIKVNSMVDEAVIDALYRASQAGVPVDIWVRGICALRPGVPGLSENIRVRSVLGRFLE
HSRIFIFGNSGEPEVWLGSADMMHRNLDRRIEALVRVTDPAHRASLNRLLETGMSDATSS
WHLGPDGEWNRRAVDADGVPLRNVQEMLIDARRRRRGPAT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcagccgagcgctcaggcacaggcccagccggagacgccgacgccgaagccc
ccgcaggccccggccccgtcggcgcagccttccgtgggctccatcgccgcacaccgcccg
cacgcggtccgcgggacggtgccgggcctggagcccgacctggacgccgacccggacgcg
tacgaggaccggggcgtggtgggcgcggacggcgaggagctgcccggcgaccgcttcctg
gaccgcgagcgcagctggctggggttcaacgagcgggtgctcgaactggccgaggacccg
gccacccccctgctcgaacgggcgaacttcctcgcgatcttcgccagcaacctggacgag
ttcttcatggtccgggtcgccggactcaaacggcggatagccaccggcgtcgccacccgc
tccgcgtccggcctccagccccgcgaggtgctggaccagatctggacgcgctcccgcgaa
ctcatggcccggcacgccgcctgcttccagcaggacatcgcgcccgagctcgccgaccag
ggcattcacctgatccgctggccggagctgaccgagaaggaacaggcccgcctgttcacc
ctcttccgccagcagatcttcccggtgctcaccccgctggccgtcgaccccgcgcacccc
ttcccgtacatctccggcctctcgctgaacctcgccgtggtcgtacgcaacccggtcagc
ggccacgaccacttcgcgcgggtcaaggtgccgccgctgctctcccgcttcctggaggcg
tccccgcagcgctacgtccccatcgaggacgtcatcgccgcccacctggaggagctgttc
ccgggcatggaggtgcgcgcgcaccacatgttccgggtcacccgcaacgaggacctcgaa
gtcgaggaggacgacgccgagaacctcctccaggccctggagaaggagctgatgcggcgc
cgcttcgggccgccggttcgcctggaggtcgaggagtccatcgaccccgccgtcctcgac
ctgctggtccaggaactgaagatctccgacgccgaggtctacccgctgcccggcccgctc
gacctcaccgggctcttcggcatcggggcgctggaccggcccgagctgaagttccccaag
ttcgtggccggcacccaccgcgacctcgccgaggtggagtccgcctccgcccccgacatc
ttcgccgcgctgcgcgcccgcgacgtcctcctgcaccacccctacgactccttctccacc
tccgtgcaggcattcctggagcaggccgccgcggaccccgacgtcctggcgatcaagcag
accctctaccgcacctccggtgactcgccgatcgtcgacgccctgatagacgccgccgag
tccggcaagcaggtcctcgtcctggtggagatcaaggctcgcttcgacgagcaggccaac
atcaagtgggcgcgcaagctggaggaggccggctgccacgtcgtctacggcctggtcggc
ctcaagacgcactgcaagctgtcactggtggtccgccaggaaggcgacatgctgcgccgc
tactcccatgtgggcaccggcaactaccacccgaagaccgcccggctctacgaggacctc
ggcctgctgaccgccgacccgcaggtcggcgccgacctctccgacctcttcaaccggctg
tccggctactcccggcgcgagacctaccgccgcctcctggtcgctcccaagtccctgcgg
gacggcctggtccagcgcatcaacaaggagatcgccaaccagcgcgcgggccggccggcc
tacgtccgcatcaaggtcaactcgatggtcgacgaggccgtcatcgacgcgctctaccgc
gcctcccaggccggcgtgccggtcgacatctgggtgcgcggcatctgcgccctgcgcccc
ggcgtccccggcctcagcgagaacatccgcgtccgcagcgtcctcggccgcttcctggag
cactcccggatcttcatcttcggcaacagcggtgaacccgaggtgtggctgggcagcgcc
gacatgatgcaccggaacctggaccggcggatcgaggcgctggtgcgggtgaccgacccg
gcgcaccgcgcctccctcaaccggctgctggagaccgggatgtcggacgccacgtcctcc
tggcacctcggcccggacggcgagtggaaccggcgcgcggtcgacgccgacggcgtgccg
ctgcgcaacgtacaggaaatgctcattgacgcccggaggcgccggcgtggcccagcgaca
tga
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