Streptomyces lydicus 103: SL103_34655
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Entry
SL103_34655 CDS
T04699
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
slc
Streptomyces lydicus 103
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slc03021
]
SL103_34655
Transcription machinery [BR:
slc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SL103_34655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
HTH_3
DUF7343
HTH_37
HTH_24
MarR
HTH_5
DUF134
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
AOP50708
UniProt:
A0A1D7VW37
LinkDB
All DBs
Position
7984793..7985602
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AA seq
269 aa
AA seq
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MTVTARTAPKAPSRESRSADTRALTQVLFAELADLEPGTPEHSRVRAALIEANLPLVRYA
AARFRSRNEPMEDVIQVGTIGLINAIDRFDPERGVQFPTFAMPTVVGEIKRYFRDNVRTV
HVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLKIGEDEVLACLEAGRSYHATSLE
AAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQIS
AELGVSQMHVSRLLSRSFARLRSANRIDA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgacggcccgtactgcgcccaaggctccatcccgcgagagccggagcgcggac
acgcgggcgctcacacaggtgctgttcgcggaactggccgatctggagcccggcaccccc
gaacacagccgcgtccgggccgccctcatcgaggccaacctgccgctggtccgctatgcc
gcggcccgcttccgcagccgtaatgagccgatggaggacgtcatccaggtcggcacgatc
gggctgatcaacgccatcgaccgcttcgaccccgagcggggcgtccagttcccgaccttc
gcgatgcccaccgtcgtcggcgagatcaaacgctactttcgagacaatgttcgtacggtc
catgtgccgcgccgcctccacgagctgtgggtgcaggtcaacggcgccaccgaggatctg
accgtgctgcacgggcgctcgcccaccaccgccgagatcgccgagcggctgaagatcggc
gaggacgaggtgctggcctgcctggaggccggccgttcgtatcacgccacctcgctggag
gccgcccaggagggcgacggcctgcccggcctgctggaccgcctcgggtacgaggacccc
gaactggccggtgtggagcaccgcgacctggtgcgacacctcctcgtccagctccccgaa
cgcgagcagcgaatccttctgctgcgttactacagcaatctgacgcagtcccagatcagt
gccgaactgggggtgtcgcagatgcatgtgtcgcggctactgtcgcggagcttcgctcgg
cttcgatccgcaaacaggatcgacgcctaa
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