Streptomyces lydicus 103: SL103_35560
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Entry
SL103_35560 CDS
T04699
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slc
Streptomyces lydicus 103
Pathway
slc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SL103_35560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slc03019
]
SL103_35560
Enzymes [BR:
slc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SL103_35560
Messenger RNA biogenesis [BR:
slc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SL103_35560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
TPR_11
Motif
Other DBs
NCBI-ProteinID:
AOP50855
UniProt:
A0A1D7VVQ5
LinkDB
All DBs
Position
complement(8182853..8184328)
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AA seq
491 aa
AA seq
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MPNANNDLPTPHAERTPQSTNALNHVQRRAVSELLRVSPVADDLARRFQEAGFTLALVGG
SVRDALLGRLGNDLDFTTDARPEDVLKIVRPWADAVWEVGIAFGTVGCKKDSFDIEVTTY
RSEAYDRTSRKPEVSYGDSIEDDLVRRDFTVNAMAVLLPEKEFVDPHGGLEDLAGRVLRT
PGTPEESFSDDPLRMMRAARFAAQLDFEVAPEVVAAMTAMSDRIEIVSAERVRDELNKLI
LAPYPRKGLRLLVDSGLADRVLPELPALRLESDEHHRHKDVYEHSLTVLEQAIDLEEDEP
DLVLRLAALLHDIGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMAALKYSNDMIKDVSLL
VELHLRFHGYGTGEWTDSAVRRYVRDAGPQLERLHKLTRSDCTTRNKRKAAALSRAYDGL
EERIARLQDQEELDAIRPDLDGNDIMEILGLRPGPEVGKAYKQMLELRLEHGPMEREAAI
AALKEWWATQG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacaatgacctccccactccgcacgccgagcggacgccgcagtcgacg
aacgcgctgaaccatgtgcagcggcgcgccgtgagcgaactgctgcgggtatcccccgtc
gcggatgatctggcccgccgattccaggaggccgggttcacgcttgccctggtcggcggc
tcggtgcgggatgcgctgctcggccggctcggcaatgacctggatttcaccacggacgct
cgccccgaggacgtcctgaagatcgtccggccgtgggcggacgcggtctgggaggtcggc
atcgccttcggcacggtcggttgcaagaaggactcgttcgacatcgaggtcacgacctac
cgttccgaggcgtacgaccgcacctcgcgcaagcccgaggtgtcctacggcgactccatc
gaggacgacctggtccgccgggacttcacggtgaacgccatggcggtactgctgccggag
aaggagttcgtcgatccgcacggcggcctggaggacctggccggccgggtgctgcggacg
ccggggacgccggaggagtcgttctcggacgacccgctgcggatgatgcgtgcggcccgt
ttcgccgctcagctggacttcgaggtcgcccccgaggtcgtcgccgcgatgacggcgatg
tcggaccgcatcgagatcgtctccgcggagcgcgtacgggacgagctgaacaagctgatc
ctcgcgccctacccgcgcaaggggctgcggctgctggtcgactccggcctggccgaccgg
gtcctgcccgagctgccggccctgcggctggagagtgacgagcatcaccggcacaaggac
gtctacgagcactcgctgaccgtcctggagcaggcgatcgatctcgaagaggacgagccc
gatctggtgctgcgcctcgcggccctgctgcacgacatcggtaagcccaggacgcgccgc
ttcgagaaggacggccgggtctcgttccaccaccatgaggtggtcggggcaaagatgacc
aagaagcgcatggccgcactgaagtactcgaacgacatgatcaaggacgtctcgctgctg
gtggagctgcatctgcgcttccacggttatggaaccggcgagtggacggactccgcggtc
cgccgctacgtgcgtgacgccggcccgcagctggagcggctgcacaagctgacccgttcc
gactgcaccacccgcaacaagcgcaaggccgctgccctgtcgcgcgcctatgacgggctg
gaagagcgcatcgcacggctgcaggaccaggaagagctggatgccatccgtccggacctg
gacggcaacgacatcatggagatcctggggctccgtccggggcctgaggtcggcaaggcg
tacaagcagatgctggagctccggctggagcacggccccatggagcgggaagcggcgatc
gcggctctgaaggagtggtgggccacgcagggctga
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