Sulfitobacter sp. LC.270.F.C4: R1T45_07885
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Entry
R1T45_07885 CDS
T11491
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
slcz Sulfitobacter sp. LC.270.F.C4
Pathway
slcz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slcz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R1T45_07885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slcz03021
]
R1T45_07885
03400 DNA repair and recombination proteins [BR:
slcz03400
]
R1T45_07885
Enzymes [BR:
slcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R1T45_07885
Transcription machinery [BR:
slcz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R1T45_07885
DNA repair and recombination proteins [BR:
slcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R1T45_07885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WOI16290
LinkDB
All DBs
Position
825202..826218
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVMAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNREHVICHLDDGADVYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggctgaattgatcaagccgcaacagcttgacgtcaagccgggc
aacgaccccgcacgtcaggcgaccgtcatggccgaaccgctggagcggggctttggcctg
accctcggcaacgcgctgcgccgcgtgctgatgtcctcgctgcagggcgcggcgatcaca
tctgtgcagatcgacaacgtgctgcacgagttttcctccgtggccggtgtgcgcgaagac
gtgaccgacatcatcctgaacctcaaaggcgtcagcctgcgcatggaagtcgaagggccc
aagcgcctgtcgatctctgccaaaggtccgggcgttgtgactgccggtgacatctccgaa
tccgccggtatcgagattctgaaccgcgagcatgtgatctgccacctcgacgatggtgca
gatgtctacatggaactgaccgtcaacaccggtaagggctatgtctcggctgacaagaac
aagcccgaagatgcgcccatcggtctgatcccgatcgacgcgatctattcgccggtcaag
aaggtttcctatgacgtgcagcccacccgtgagggccaggtgctggactatgacaagctg
accatgaaagtggaaacagacgggtccatcacgccggatgacgccgtggcctttgccgcg
cgcatcctgcaggaccagctgggcatcttcgtcaactttgacgagccggaatcggcgtcc
cgtcaggacgacgacgatggtcttgagttcaacccgttgctgctcaagaaagtcgacgag
ttggaactgtctgtgcgttcggcgaactgcctgaagaacgacaacatcgtctatatcggt
gacctgatccagaagaccgaagccgaaatgctgcgcacgccgaactttggccgcaagtcc
ttgaacgagatcaaggaagtgctgtcgggcatgggcctgcaccttggcatggatgtcgaa
gactggccgccagaaaacatcgaagacctcgccaagaagttcgaggattcgttctaa
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