Streptomyces lydicus A02: T261_1288
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Entry
T261_1288 CDS
T03756
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T261_1288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sld03000
]
T261_1288
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_1288
Enzymes [BR:
sld01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
T261_1288
Transcription factors [BR:
sld03000
]
Prokaryotic type
Helix-turn-helix
AraC family
T261_1288
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T261_1288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AJT62974
LinkDB
All DBs
Position
complement(1346444..1347943)
Genome browser
AA seq
499 aa
AA seq
DB search
MMSEGSKYEAVCSRDARFDGDFFFAVTTTGIYCRPSCPATTPKQKNVRFFPTAAAAQGSG
FRACRRCRPDAVPGSAEWNVRADMVGRAMRLIGDGVVDREGVAGLARRLGYSARQVQRQL
NAELGAGPVALARAQRSHTARILLQTTPLPIAEIAFASGFASVRQFNDTIREIHALTPTQ
LRAARPGRTTRFGPVAQPAGAGGIPLRLAFRGPYAAAEVFDYLERRALTGIEEILGEPGT
RTYRRTLRLPGGSGIAEVDERPGGGADGTGGWLECRLHLSELRDLTTATQRIRRLLDLDA
DPYAVADHLSQDPLLAALVAQRRGLRSPGTCDAHELAVRAVLGQQVSVPAGRKLGNAAVA
AYGEPLAEPSGGLTRLFPATEDLAAASLEELGMPDSRRTTLRTLAAALADGTVPLDAGAD
RDQAEKELLNLRGIGPWTAGYIRMRALGDPDVLLEGDVAVLAGMRNSGASMADSDAWRPW
RSYAMHHFWNAKARPQAAV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgatgagcgagggcagcaagtacgaggcggtgtgcagccgcgatgcgcgattcgacggc
gatttcttcttcgccgtcaccacgaccgggatctactgccggccgagctgcccggccacg
acccccaagcagaagaacgtccgcttcttcccgaccgccgccgcggcccagggctccggc
ttccgggcctgccgccgctgtcgtccggacgcggtgcccggctccgccgagtggaacgtc
cgggccgatatggtcggccgcgccatgcgcctgatcggtgacggtgtcgtcgaccgcgaa
ggcgtcgccggcctcgcccggcggctcggctacagtgcccgccaggtgcagcgccagctg
aacgccgagctcggcgccggcccggtggccctggcccgcgcccagcgctcgcacaccgcg
cggatactgctccagacgactccgctgccgatcgccgagatcgccttcgcctccggattc
gccagcgtgcggcagttcaacgacaccatccgcgagatccacgcactcacgcccacccag
ctgcgcgccgcccggcccggccggaccacccgcttcggtccggtggcgcagccggccggc
gcgggcggcataccgctgcgcctggccttccgcggaccgtacgccgccgccgaggtcttc
gactacctcgaacgccgcgcgctcaccggcatcgaggagatcctcggcgagcccggcacc
cgcacctaccgccgcaccctgcggctgccgggcggctccggtatcgccgaggtcgacgag
cggccgggcggcggcgcggacggcaccggcggctggctggaatgccggctgcacctgagc
gaactgcgcgatctgaccaccgccacccagcggatccgccgcctgctcgacctggacgcc
gacccgtacgccgtcgccgaccacctcagccaggacccgctgctcgccgcgctcgtggcc
cagcgccggggactgcgctcgcccggcacctgcgacgcccacgaactcgccgtacgcgcc
gtgctcggccagcaggtgtcggttcccgcgggccggaagctcggcaatgccgccgtcgcc
gcctacggcgaaccgctcgccgagcccagcggcggtctcacccgtctcttccccgccacg
gaggacctggccgcggcctccctcgaggagctcggcatgcccgactcccgccgcaccacc
ctgcgtaccctcgccgccgcgctcgccgacggcaccgtaccgctcgacgccggagccgac
cgcgaccaggccgagaaggagctgctgaacctgcgcggcatcgggccctggacggccggc
tacatccggatgcgggccctcggcgaccccgatgtgctgctggagggcgatgtcgcggtg
ctcgccgggatgcggaactccggtgcgtcgatggccgattcggacgcctggcggccctgg
cgctcctacgccatgcaccacttctggaacgccaaggcccggccgcaggcggccgtctga
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