Streptomyces lydicus A02: T261_2331
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Entry
T261_2331 CDS
T03756
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sld
Streptomyces lydicus A02
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sld03009
]
T261_2331
Enzymes [BR:
sld01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
T261_2331
Ribosome biogenesis [BR:
sld03009
]
Prokaryotic type
ribosomal protein modification factors
T261_2331
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AJT64014
LinkDB
All DBs
Position
complement(2519291..2520784)
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISGRLQTIL
SGGNIEAHAPRDRRKLLPISPAERQGAGVALPGHAQDAPQDTAPEDLPEGLAPASGPRAP
LRRRLGSSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIML
VSENNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLIDVLTGTDKVAP
YFDLSFQHSAPGVLRAMRRFGDTDRFLGLLEQIRTKAPQAGARSNFIVGFPGETESDLAE
LERFITEARLDAVGVFGYSDEDGTEAATYDNKVDPEVVAERLAKVSWLAEELTSQRAEER
VGETVRVLVDRIDEEDGVVGRAAHQAPETDGVTILTNGRDLAPGRMVEAKVVASEGVDLV
AEVLSVDGTACTEEAGR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggagctcgtcgaggaagccgcc
gacgcggatgtcgccgtcgtcaacacctgtggattcgtcgaggccgccaagaaggactcc
gtcgacgccctgctggaagccaatgatctcaaggatcatggccgcacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggagctcgccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactacgccgatatctccggccgtctgcagaccatcctc
agcggcgggaacatcgaggcccacgccccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcgccagggtgccggggtcgcgctgcccggccacgcccaggacgccccgcag
gacaccgcgcccgaggacctgccggagggcctcgcgcccgcctccgggccgcgtgcgccg
ctgcgccgcagactcggcagcagcccggtggcctcggtgaagctggcctccggctgcgac
cggcgctgctcgttctgcgcgatcccgtccttccgcggttcgttcatctcccgccgtccc
tcggacgtgctcggcgagacccgctggctggccgagcagggcgtcaaggagatcatgctg
gtctccgagaacaacacctcctacggcaaggacctcggcgacatccgcctgctggagacg
ctgctgccggagctggcggcggtcgacggcatcgagcggatccgggtcagctatctgcag
cccgccgagatgcgccccgggctgatcgacgtcctgaccggtacggacaaggtcgcgccc
tacttcgatctgtccttccagcactcggcgcccggcgtgctgcgcgcgatgcggcgcttc
ggcgacaccgaccggttcctcggcctgctggagcagatccgtacgaaggcgccgcaggcc
ggtgcccgctccaacttcatcgtcggcttcccgggcgagaccgagagtgatctcgccgag
ctggagcgcttcatcaccgaggcgcgcctggacgccgtcggcgtcttcggctactccgac
gaggacggtacggaagccgccacgtacgacaacaaggtcgatcccgaggtggtcgccgag
cggctggcgaaggtgtcctggctcgccgaggagctgacctcgcagcgcgcggaggagcgg
gtcggcgagaccgtgcgggtgctggtggaccggatcgacgaggaggacggcgtcgtcggg
cgggccgcgcaccaggcgccggagaccgacggtgtcacgatcctcacgaacggccgggac
ctggctcccggacgtatggtcgaagcaaaggtcgttgcgagcgagggcgtcgatctcgtg
gccgaggtgctgtcggtggacggcaccgcgtgtaccgaggaggcgggcagatga
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