Streptomyces lydicus A02: T261_2804
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Entry
T261_2804 CDS
T03756
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sld
Streptomyces lydicus A02
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sld03021
]
T261_2804
Transcription machinery [BR:
sld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T261_2804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_23
MarR_2
HTH_24
Sigma70_ECF
MarR
HTH_Crp_2
NirdL-like_HTH
HTH_3
IF2_N
HTH_AraC
DinB_2
GerE
Motif
Other DBs
NCBI-ProteinID:
AJT64477
LinkDB
All DBs
Position
3046568..3047578
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AA seq
336 aa
AA seq
DB search
MKDLERGTRMAPGAAIPEQQARPHPVGTDDHGGRLDAAEQAERADHMDQSEQQGQQADRL
DQPAPGLKPRAEQHPEERHPHEPHDPQDRSGARAMFYELRKLPDGSPERAELRNTLVRMH
LPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHF
RDKGWAVRVPRRLQELRLSLTTATAELSQRHGRAPTVHELAEHLAISEEEVLEGLESANA
YSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGN
MTQSQIAQEVGISQMHVSRLLARTLAQLRDKLLVEE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatctcgaacgcggcacgcggatggcgcccggtgcggccatccccgagcagcag
gcccggccgcatccggtgggcacggacgaccacggcggccggttggacgcggcggagcag
gcagagcgggcggaccacatggaccagagcgagcagcaggggcagcaggcggaccggctt
gatcagccggcccccggcctgaagccccgggcagaacagcatcccgaagaacggcatccc
cacgagccgcacgatccccaggaccgcagcggcgcgcgggcgatgttctacgagctgcgc
aaactccccgacggctccccggagcgcgcggagctgcgcaacaccctcgtacggatgcac
ctcccgctcgtcgagcacctggcccgccggttccgcaaccgcggcgagcccctcgacgat
ctgacccaggtcgccacgatcggcctgatcaagtcggtggaccgcttcgacccggagcgc
ggcgtggagttctccacgtatgccacgcccaccgtggtcggggagatcaagcggcacttc
cgcgacaagggctgggcggtccgcgtcccgcgccgtctccaggagctgcggctgtcgctg
accaccgcgaccgccgagctctcccagcgccatggccgggcgccgacggtccatgagctg
gccgagcatctggcgatctccgaggaagaggtcctggagggcctggagtcggcgaacgcg
tacagcacgctctccctggacgtgccggacaccgatgacgagtccccggccgtcgccgac
accctcggcgccgaggacgaggcgctggagggcgtggagtaccgcgaatccctcaagccg
ctgctggaggacctcccgccgcgcgagaagaagatcctgctgctccgcttcttcggcaac
atgacccagtcacagatcgcccaggaggtcggcatctcccagatgcacgtctcccggctc
ctggcccgcacgctcgcacagctgcgggacaagctcctcgtggaggagtga
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