Streptomyces lydicus A02: T261_3392
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Entry
T261_3392 CDS
T03756
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
T261_3392
09124 Replication and repair
03420 Nucleotide excision repair
T261_3392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sld03021
]
T261_3392
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_3392
Enzymes [BR:
sld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T261_3392
Transcription machinery [BR:
sld03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
T261_3392
DNA repair and recombination proteins [BR:
sld03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
T261_3392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJT65061
LinkDB
All DBs
Position
3685007..3686647
Genome browser
AA seq
546 aa
AA seq
DB search
MIVQSDKTLLLEVDHELADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGHDAEQ
VVDALVQFSRYPVPHALLVDIAETMSRYGRLSLTKHPAHGLVLTTTDRPVLEEILRSKKV
QPLVGARIDPDSVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELREDGWALRPY
QQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHELVKRT
SLTADEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVHLLPA
PVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPADCVE
VRVNLTESERLTYAMAETEEKYRYCATTASKQSVTEALVRRHQGEQTLVIGQYIDQLDEL
GEHLDAPVIKGETTNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSGTFGS
RQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDSDELL
AADEEW
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgtccagagcgacaagacgctgctcctggaggtggaccatgagctggccgacgcc
tgccgtcgggccatcgcgccgttcgcggagctggagcgggcgccggagcacatccacacg
taccgggtgacgccgctggggctgtggaacgcgcgggccgccgggcatgacgccgagcag
gtcgtggatgcgctggtgcagttctcgcggtatccggtgccgcatgcgctgctggtcgac
atcgcggagacgatgtcgcggtacgggcggctgtcgctgaccaagcacccggcgcacggg
ctggtgctgaccaccaccgaccggccggtgctcgaggagatcctgcggtcgaagaaggtg
cagccgctggtcggggcccggatcgacccggacagcgtcgtcgtgcacccctccgagcgg
gggcagatcaagcagacgctgctgaagctgggctggcccgccgaggacctcgccggctac
gtggacggtgaggcacatccgatcgagctgcgcgaggacggctgggcgctgcggccgtat
cagcagcaggccgtggaggggttctggcacggcggctcgggtgttgtcgtactgccctgt
ggtgcgggaaagacgctggtcggggccggtgcaatggctcaggcgaaggccaccacgctg
atcctggtcaccaacacggtctcggcgcggcagtggaagcacgagctggtgaagcggacc
tcgctgaccgcggacgagatcggtgagtacagcggcacgaggaaggagatccggccggtc
accatcgcgacgtatcaggtgctgaccacgaagcggaagggtgtgtacccgcatctggag
ctcttcgactcccgcgactggggcctgatcgtctatgacgaggtgcatctgctgcccgcg
ccggtcttcaagttcaccgccgatctgcaggcgcggcggcggctggggctgaccgcgacg
ctcgtacgggaggacgggcgggagtcggatgtcttctcgctcatcgggccgaagcgcttc
gacgccccgtggaaggagatcgaggcgcaggggtatatcgccccggccgactgcgtggag
gtacgggtcaatctgaccgagtcggagcggctgacgtatgcgatggccgagaccgaggag
aagtaccggtactgcgcgacgacggccagcaagcagagtgtgacggaggcgctggtccgg
cgtcatcagggcgagcagacgctggtcatcgggcagtacatcgaccagctggacgagctg
ggcgagcatctggacgcgccggtgatcaagggggagaccaccaacgcgcagcgggagaag
ctcttcgacgcgttccgggagggggagatctcggtgctggtcgtctcgaaggtggcgaac
ttctcgatcgatctgcccgaggccacggtcgcgattcaggtgtccggcacgttcgggtcg
cggcaggaggaggcgcagcggctggggcgggtgctgcggcccaaggcggacggccacgag
gcgcggttctactcggtcgtcgcccgcgacaccatcgaccaggacttcgcggcgcaccgc
cagcgcttcctggccgagcaggggtacgcgtaccggatcgtggactcggacgagctgctg
gcggcggacgaggagtggtga
DBGET
integrated database retrieval system
