Streptomyces lydicus A02: T261_3646
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Entry
T261_3646 CDS
T03756
Name
(GenBank) DNA repair protein RadA-like protein
KO
K04485
DNA repair protein RadA/Sms
Organism
sld
Streptomyces lydicus A02
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_3646
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
T261_3646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA_22
Lon_C
AAA_16
DnaB_C
nSTAND3
AAA
AAA_14
ABC_tran
NACHT
NTPase_1
AAA_5
AAA_24
DUF7125
DAP3
AAA_30
MCM
AAA_29
DUF7129
RsgA_GTPase
SLFN-g3_helicase
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AJT65311
LinkDB
All DBs
Position
3925560..3926972
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AA seq
470 aa
AA seq
DB search
MATRKTSAKERPSYRCTECGWTTAKWLGRCPECQAWGTVEEFGGAPAVRTTAPGRVTTAA
VPIAQVDGRQAAARSTHVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASDE
HRTLYVTGEESASQVRLRADRIGALDDHLYLAAETDLSAVLGHLDAIKPSLLILDSVQTV
ASPEIEGAPGGMAQVREVAGALIRASKERGMATLLVGHVTKDGAIAGPRLLEHLVDVVLH
FEGDRHARLRLVRGVKNRYGTTDEVGCFELHDEGITGLADPSGLFLTRRDEPVPGTCLTV
TLEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYSA
TVGGVKLTEPAADLAVALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLSEAAR
LGFTHALVPSDPGKIPDGMRVMEVADVGQALSVLPKRVRREAPREEDVRR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgtaaaacgtcggccaaggagcgcccctcctaccgttgcaccgagtgcggc
tggaccaccgcgaagtggctcggccgctgccccgagtgccaggcgtggggcacggtcgag
gagttcggcggcgcccccgcggtgcgcaccaccgcgcccggccgggtcaccaccgccgcg
gtgcccatcgcccaggtcgacggcagacaggccgccgcccgctcgacgcacgtccccgag
ctggaccgcgtcctcggcggcgggctggtccccggcgcggtcgtcctcctggcgggcgag
ccgggcgtcggcaagtccaccctcctcctggatgtcgccgccaaagccgcctccgacgaa
caccgcacgctgtacgtcacgggagaggaatccgcgagccaggtacgactgcgcgccgac
cgcatcggcgccctcgacgaccacctctacctcgccgccgagacggacctctccgccgtc
ctcggccacctcgacgccatcaagccctccctgctgatcctcgactccgtccaaaccgtc
gcctcccccgagatcgagggtgcgcccggcggtatggcccaggtccgcgaggtcgccggc
gcgctcatccgggcgtccaaggaacgcgggatggccaccctgctggtcggccatgtcacc
aaggacggcgccatcgccggcccgcggctcctcgagcacctcgtcgatgtcgtcctgcac
ttcgagggcgaccgccacgcccgcctccgtctggtccgcggcgtcaagaaccgctacggc
acgacggacgaggtcggctgcttcgagctgcacgacgaggggatcacgggcctcgccgac
ccctccggcctcttcctgacccgccgcgacgagcccgtgcccggtacgtgcctgacggtc
accctggagggccgccgccccctggtggccgaggtccaggccctgaccgtcgactcccag
atcccctccccgcgccggacgacctccggcctggagacctcccgggtctcgatgatgctc
gccgtcctggagcagcgcggccggatcagcgccctgggcaaacgggacatctacagcgcg
acggtcggcggcgtgaagctcaccgagcccgccgccgacctcgccgtggccctcgccctg
gccagcgccgccagcgacacccccctgccgaagaacctcgtcgccatcggcgaggtgggc
cttgcgggcgaggtcagacgggtcaccggcgtccagcggcgcctctcggaagcggcccgg
ctcggcttcacccacgccctggtcccctccgaccccggcaagatccccgacggaatgcgg
gtcatggaagtcgccgatgtcgggcaggcgctgtccgtgctgcccaagcgggtacgccgg
gaggccccgcgggaagaggatgtacgccggtag
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