Streptomyces lydicus A02: T261_4518
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Entry
T261_4518 CDS
T03756
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sld
Streptomyces lydicus A02
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sld03016
]
T261_4518
Enzymes [BR:
sld01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
T261_4518
Transfer RNA biogenesis [BR:
sld03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
T261_4518
Prokaryotic type
tRNA splicing ligases
T261_4518
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AJT66161
LinkDB
All DBs
Position
4817559..4818752
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AA seq
397 aa
AA seq
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MSYTEVPGAQVPIRMWTDPAAVEDVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQVLPVGRGMHDAPVDPA
RLHGVATAGWGDFWARFDGVAEAVKFRHERATKQMGTLGGGNHFWEFCIDADQAVWIMLH
SGSRNIGKELAEYHMGVAQKLPQNQGLVDRDLAVFIADTPQMAAYRNDLFWAQEYAKHNR
EIMMALTQDVIRREFKKAKVTFEEVISCHHNYVAEERYDGMDLLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVRGLGNPASFNSASHGAGRKMSRNAAKKRFSTRDLEEQTRGVECRKDSG
VIDEIPGAYKPIEKVMEQQRDLVEVVAHLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaggtgcccggcgcgcaggtacccatccggatgtggacggacccggcc
gcggtcgaggacgtcgcgatgcagcagctgcgcaacgtcgccaccctgccgtggatcaag
ggcctggccgtgatgccggatgtgcattacggcaagggggccacggtcggttcggtgatc
gcgatgcggggggcggtctgcccggcggcggtcggtgtcgacatcggctgcgggatgagc
gcggtgaagacctcgctgaccgccaacgacctgcccggtgatctctcccggctgcggtcg
aagatcgagcaggtgcttcccgtggggcgggggatgcacgacgcgccggtcgacccggcg
cggctgcacggcgtcgcgaccgcggggtggggggacttctgggcccggttcgacggcgtc
gcggaggcggtcaagttccgtcatgagcgggccacgaagcagatgggaacgctcggcggc
ggaaaccacttctgggagttctgcatcgacgccgaccaggccgtgtggatcatgctgcac
tccggatcccgcaacatcggcaaggaactcgccgagtaccacatgggcgtggcccagaag
ctgccgcagaaccaggggctggtcgaccgcgacctcgccgtcttcatcgcggacaccccg
cagatggcggcgtaccgaaacgatctgttctgggcgcaggagtacgcgaagcacaaccgc
gagatcatgatggccctcacccaggacgtgatccggcgcgagttcaagaaggcgaaggtg
accttcgaggaggtcatctcctgccaccacaactatgtggcggaggagcggtacgacggt
atggacctgctggtgacccgtaagggcgccatccgggcggggagcggcgagttcggcatc
atcccgggctcgatgggcaccggctcctacatcgtcaggggcctggggaaccccgcgtcc
ttcaactccgcctcgcacggcgccggccggaagatgagccgtaacgccgccaagaagcgg
ttctcgacgcgggacctggaggagcagacgcggggtgtggagtgccgtaaggactcggga
gtgatcgacgagatcccgggcgcctacaagccgatcgagaaggtcatggagcagcagcgg
gacctcgtggaggtcgtcgcccacctcaagcaggtggtctgcgtgaagggctga
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