Streptomyces lydicus A02: T261_4693
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Entry
T261_4693 CDS
T03756
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T261_4693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sld03021
]
T261_4693
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_4693
Enzymes [BR:
sld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T261_4693
Transcription machinery [BR:
sld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T261_4693
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T261_4693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AJT66332
UniProt:
A0A0D4DRW8
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All DBs
Position
4983964..4984986
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgctcagcgtccctcgttgaccgaagaggtcgtcgacgaataccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactctctccgccgg
accctcctgtcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggcgtgctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctgaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtgaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcaggtgggccaggagatcggc
cgtattccggtcgactccatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccgcgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgcccttgccgccgacctggcgctgccgatcgaggagctcgagctcaccgttcgttcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctcgtggcgcgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgctgcg
gccgacgccttcggcgccgacgacgacgcggatgccgggttcgtcgagaccgagcagtac
taa
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