Streptomyces lydicus A02: T261_4720
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Entry
T261_4720 CDS
T03756
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T261_4720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sld03019
]
T261_4720
03110 Chaperones and folding catalysts [BR:
sld03110
]
T261_4720
03029 Mitochondrial biogenesis [BR:
sld03029
]
T261_4720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sld04147
]
T261_4720
Enzymes [BR:
sld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
T261_4720
Messenger RNA biogenesis [BR:
sld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
T261_4720
Chaperones and folding catalysts [BR:
sld03110
]
Heat shock proteins
HSP60 / Chaperonin
T261_4720
Mitochondrial biogenesis [BR:
sld03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
T261_4720
Exosome [BR:
sld04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
T261_4720
Exosomal proteins of other body fluids (saliva and urine)
T261_4720
Exosomal proteins of breast cancer cells
T261_4720
Exosomal proteins of colorectal cancer cells
T261_4720
Exosomal proteins of bladder cancer cells
T261_4720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJT66359
LinkDB
All DBs
Position
5010379..5012007
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDELLASSRPIDSKSDIAAVAALSAQDKQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLEDPYILIHQGKIASIQDLLPLLEKVIQ
AGGSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTVTKDDTTIVDGGGNSDDVAGRVAQIKSEIETTDSDW
DREKLQERLAKLAGGVCVIRVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGKEGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITAKVAEQDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEDGEAGHGHGHGH
AH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagctggccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgccccgacgatcaccaacgacggtgtcaccatcgcgcgcgaggtcgag
gtcgaggacccgtacgagaacctgggcgcccagctcgtcaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgc
gagggcctgcgcaacgtcgccgcgggcgcctccccggccgccctgaagaagggcatcgac
gcggccgtcaaggccgtctccgacgagctgctggcgagctcccgcccgatcgactccaag
tcggacatcgctgccgtcgccgccctgtccgcccaggacaagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctctcgccg
tacatggtcaccgaccaggagcggatggaggccgtcctcgaggacccgtacatcctgatc
caccagggcaagatcgcctccatccaggacctgctgccgctgctggagaaggtcatccag
gcgggtggctccaagccgctgctgatcatcgccgaggatgtcgagggcgaggcgctctcc
accctggtcgtcaacaagatccgtggcaccttcaacgccgtggccgtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctcggcgacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggcaccgcc
cgccgcgtgaccgtcaccaaggacgacaccaccatcgtcgacggcggcggcaacagcgac
gacgtcgccggccgcgtcgcccagatcaagtccgagatcgagaccaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgccaagctcgccggcggcgtctgcgtcatccgc
gtgggtgcggccaccgaggtcgagctcaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctggtc
cacgccgtcaaggtgctcgagggcaacctcggcaaggagggcgacgaggccaccggtgtc
gccgtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtgatcaccgcgaaggtcgccgagcaggacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctcctcctgacgaccgagaccctg
gtcgtcgagaagaaggaagaagaggacggcgaggccggtcacggccacggtcacggccac
gcgcactga
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