Streptomyces lydicus A02: T261_5033
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Entry
T261_5033 CDS
T03756
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sld
Streptomyces lydicus A02
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sld03021
]
T261_5033
Transcription machinery [BR:
sld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T261_5033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
Sigma70_ECF
HTH_Crp_2
HTH_24
MarR
HTH_3
DUF7343
Apolipoprotein
GerE
Motif
Other DBs
NCBI-ProteinID:
AJT66668
LinkDB
All DBs
Position
complement(5353491..5354492)
Genome browser
AA seq
333 aa
AA seq
DB search
MSPRLDEMRTDDTRQHTSSTPLSPLSDPTGHIPSQASPSPSPSAQPLPDQTDSAASDMAE
MPEMPEIDGLPEIPPFDEVGPVDARALSKTLFERLETLEEGTHEFAYVRNTLVELNLALV
KFAASRFRSRSEPMEDIVQVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTS
WSVRVPRRLQELRLDLAKAGDELAQKLDRAPTVSELAERLDITKDEVVEGMAASNAYTAS
SLDAQPEEDDSEGALADRIGYEDNGLEGIEYVESLKPLIAELPPRDRKILALRFVANMTQ
SEIGEELNISQMHVSRLLSRTLGRLRKGLMVEE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaaatgcgcaccgacgacacccggcagcacacctcgtcgaca
cccctgtcacccctgtccgacccgacggggcacatcccttcccaggcgagcccttccccg
tcgccgtctgcccagcccctccctgaccaaacagactccgcggcatccgacatggcagaa
atgccggagatgcccgagatcgacggtctgcccgagatcccgcccttcgacgaggtgggg
ccggtggacgcgcgggcactgtccaagaccctcttcgagcggctggaaacgctcgaggaa
ggcacgcatgaattcgcctacgtccgtaacaccctggtcgagctcaacctcgccctggtg
aagttcgcggcctcccggttccgctcccgcagcgaacccatggaggacatcgtccaggtc
ggcacgatcggcctgatcaaggcgatagaccgcttcgagctgagccgcggcgtggagttc
ccgacgttcgcgatgccgaccatcgtcggcgagatcaaacgcttcttccgcgacaccagc
tggtcggtacgggtaccgaggcgtctgcaggaactgcggctggatctcgccaaggcaggc
gatgaactggcccagaagctcgaccgcgcccccacggtgagcgagctcgccgaacgcctc
gacatcaccaaggacgaggtcgtcgaagggatggccgcgagcaacgcctacaccgcgagc
tcgctggacgcccagcccgaggaggacgacagcgaaggcgcactggcggaccgcatcggc
tacgaggacaacggcctcgaaggaatcgagtacgtcgaatcgctcaagccgctgatcgcc
gaactcccgccgcgcgaccgcaagatcctcgcgctgcgtttcgtcgccaatatgacgcag
tccgagatcggcgaggagctgaacatctctcagatgcacgtctcccggctgctctcgcgc
acgctcggcaggctccgcaaggggctgatggtcgaggagtga
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