Streptomyces lydicus A02: T261_5305
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Entry
T261_5305 CDS
T03756
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
T261_5305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sld03019
]
T261_5305
03009 Ribosome biogenesis [BR:
sld03009
]
T261_5305
Messenger RNA biogenesis [BR:
sld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
T261_5305
Ribosome biogenesis [BR:
sld03009
]
Eukaryotic type
Pre-60S particles
RNases
T261_5305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJT66931
LinkDB
All DBs
Position
complement(5658132..5658752)
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AA seq
206 aa
AA seq
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MNDRMVWIDCEMTGLSLANDALIEVAALVTDSELNVLGDGVDVVIRPPAEALTTMPEVVR
AMHTASGLLDELDRGTTLEDAEAQVLAYIRQHVPEPGKAPLCGNSVGTDRGFLLRDMPTL
ENYLHYRIVDVSSVKELARRWYPRAYFNSPDKSGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTARAIAAKHVLPAEPQATPE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggactctcgctggcgaatgac
gcactcatcgaggtggccgcgctggtcaccgactcggagctgaatgtgctgggcgacggg
gtggacgtggtgatccgccctccggccgaggcactgaccaccatgccggaggtggtgcgc
gccatgcacaccgcctccggcctgctggacgagctggaccggggcacgacgctcgaggac
gccgaggcgcaggtgctcgcgtacatcaggcagcatgtgccggagccggggaaggccccg
ctgtgcgggaactccgtcggcaccgaccgcggctttctgctgcgcgacatgccgacgctg
gaaaactatctccactaccggatcgtcgatgtgtcgtccgtgaaggagctggcccggcgc
tggtatccgcgggcctacttcaacagtccggacaagagcggcaatcaccgggcgctggcc
gacatccgcgaatccatcgcggaattgcggtactaccgggaggcggtcttcgtgccgcag
ccgggcccggactccgacaccgccagggcgatcgcggcgaagcacgtcctgcctgccgaa
ccgcaggccacaccggagtga
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