Streptomyces lydicus A02: T261_5333
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Entry
T261_5333 CDS
T03756
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T261_5333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_5333
Enzymes [BR:
sld01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
T261_5333
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T261_5333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
TraI_hel_assoc_N
NPHP3_N
AAA_16
PhoH
HTH_IclR
nSTAND3
UvrD-helicase
AAA
DEAD
TrwB_AAD_bind
SLFN-g3_helicase
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AJT66959
LinkDB
All DBs
Position
5695897..5698128
Genome browser
AA seq
743 aa
AA seq
DB search
MGQGMDRGVVSGSVVEGVLERITYANEETGYTVARVDTGRGAGDLLTVVGALLGAQPGES
LRMEGRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPRIADRITEHFGTD
TLDVIEKEPGRLIEVPGLGPKRTKMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKY
GDASISVVRNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSTDQGH
CFLPEEQLIADAVKLLQVDTGLVIDCLGELADDPEGVVREQVPGSDGEPVTAVYLVPFHR
AEISLAGRLTRLMRSAEDRMPAFGDVVWDKALAWLARRTGAELAPEQQAAVRLALTQKVA
VLTGGPGCGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLSELTGADASTVHRLLELKP
GGDAAYDADRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEV
LRDLLAEPGPVPSVRLTRIFRQAQQSGVVTNAHRINSGVPPLTTGLKDFFLFAEEDTEAA
GRLTVDVAAHRIPAKFGLDPRRDVQVLAPMHRGPAGAGALNGLLQQAVTPARPDLPERRF
GGRVFRVGDKVTQIRNNYDKGRNGVFNGTVGVVTALDAVEQRLTVLTDEDEEVPYGFDEL
DELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRKALG
QAVRTVSAGRRCTALDHRLAAAM
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggggcagggcatggatcggggcgtggtcagcggatcggtggtggaaggggtcctcgag
cggatcacctacgccaatgaggagaccggctacaccgtcgcgcgggtcgacaccggccgc
ggcgcgggcgatctcctcacggtcgtcggcgcactgctgggggcgcagcccggggaatcc
ctgcggatggaggggcgctggggctcccatccgcagtacggcaagcagttcaccgtcgag
aactacaccaccgtcctgccggccacgatccagggcatccgccgctatctcggctcgggc
ctgatcaagggcatcggcccccgcatcgccgaccgcatcaccgagcacttcggcacggac
accctcgacgtcatcgagaaggagcccgggcggctcatcgaggtcccggggctgggcccc
aagcgcacgaagatgatcggcgcggcgtgggaggagcagaaggccatcaaggaggtgatg
gtcttcctccagggcgtcggcgtctcgacgtcgatcgcggtgcggatctacaagaagtac
ggcgacgcctccatctccgtcgtccgcaaccagccctaccgcctcgccgccgatgtctgg
ggcatcggcttcctgacggccgaccgcatcgcgcaggcggtgggcattccgcacgacagt
ccggaccgcgtcaaggcgggtctgcagtacgcgctgtcgcagtcgacggaccaggggcac
tgcttcctgcccgaggagcagctgatcgcggacgcggtcaagctgctccaggtggacacc
ggcctggtcatcgactgcctgggggagctggccgacgaccccgagggggtggtgcgcgag
caggtgcccggcagcgacggggagccggtcaccgccgtctatctcgtgccgttccaccgc
gccgagatctcgctggccgggcggctgacccggctgatgcgcagcgccgaggaccggatg
ccggcgttcggggacgtggtctgggacaaggcgctggcgtggctggcgcggcgtacgggg
gccgagctggcaccggagcagcaggcggcggtgcggctggcgctgacgcagaaggtggcg
gtgctgaccggcgggcccggctgcggcaagtccttcacggtgcgctccgtggtggagctg
gcccgcgcgaagaaggcgaaggtggtgctggcggcgcccaccgggcgggcggccaagcgg
ctgtcggagctgaccggggcggacgcctccacggtccaccgcctcctggagctcaagccc
ggcggggacgccgcctatgacgcggaccgcccgctggacgccgatctggtggtcgtcgac
gaggcgtcgatgctggatctgctgctggccaacaaactcgtcaaggcggtgccgccgggc
gcccatctgctgctggtcggggatgtcgaccagctgccgtcggtgggcgcgggcgaggtg
ctgcgggatctgctcgccgagccgggcccggtgccgtccgtgcggctgaccaggatcttc
cgccaggcgcagcagtccggggtggtgaccaacgcgcaccgcatcaactccggtgtcccg
ccgctgacgacggggctgaaggatttcttcctgttcgccgaggaggacaccgaggcggcc
gggcggctgacggtggacgtggcggcgcaccggatcccggcgaagttcgggctcgacccg
cgccgggatgtccaggtgctggccccgatgcaccgcggcccggccggcgccggcgccctc
aacggcctcctccagcaggccgtcacccctgcccgccccgatctgcccgagcgccggttc
ggcggccgggtcttccgggtgggcgacaaggtcacccagatcagaaacaactacgacaag
ggccgcaacggcgtcttcaacgggacggtgggggtggtcaccgccctggacgccgtcgag
cagcggctgaccgtgctcaccgacgaggacgaggaggtcccctacggcttcgatgaattg
gacgaattggcacacgcctatgccgtgacgatccaccgctcgcagggtagtgagtatcca
gcggtggtgattccggtcacgaccggagcgtggatgatgctgcagcgcaatctgctgtat
accgccgtgaccagggcaaaacgtctggtcgtgctggtcggttcccggaaggccctgggg
caggccgtgcgcaccgtatccgccggtcggcggtgtacggcgctcgatcaccggctcgcc
gccgccatgtga
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