Streptomyces lydicus A02: T261_5504
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Entry
T261_5504 CDS
T03756
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03030
DNA replication
sld03430
Mismatch repair
sld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T261_5504
03430 Mismatch repair
T261_5504
03440 Homologous recombination
T261_5504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sld03032
]
T261_5504
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_5504
Enzymes [BR:
sld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T261_5504
DNA replication proteins [BR:
sld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T261_5504
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T261_5504
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Lysyl_endopep_N
Motif
Other DBs
NCBI-ProteinID:
AJT67125
LinkDB
All DBs
Position
5891050..5892054
Genome browser
AA seq
334 aa
AA seq
DB search
MGCWTAMARKTANDAPLAPVTIAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTSDQLQ
PGTLAELTSPSLFAERKVVVVRNAQDLSADTIKDVKAYLGAPAEEITLVLLHAGGAKGKG
LLDAARKAGAREVACAKMTKPADRLAFVRAEFRAAGRSATPEACQALVDAIGSDLRELAS
ACSQLTADVEGTIDEAVVARYYTGRAEASSFTVADRAVEGRAAEALEALRWAMATGVAPV
MITSALAQGVRAIGKLASAPRGARPGDLARELGMPPWKIDRVRQQMRGWSADGVATALRA
VAAADAGVKGGGDDPGYALEKAVVAIARAARSHR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgggatgctggaccgcgatggccaggaagacagctaacgacgccccgctcgcccccgtc
acgatcgccgtgggccaggaggacctgctcctcgaccgtgccgtgcagcaggtggtggcg
gccgcccgcgccgccgacgcggacaccgatgtccgcgacctcacctccgaccagctgcag
cccggcaccctcgccgagctcaccagcccctcgctcttcgccgagcgcaaggtggtcgtg
gtgcgcaacgcccaggacctttccgcggacaccatcaaggacgtcaaggcgtatctcggc
gcgcccgccgaggagatcaccctcgtcctcctgcacgccggtggcgccaagggcaagggg
ctgctggatgccgcccgtaaggccggcgcgcgcgaggtggcctgcgccaagatgaccaag
ccggcggaccggctggcgttcgtacgggccgagttccgggcggccgggcggtccgcgacg
ccggaggcgtgccaggcgctggtcgatgcgatcggcagcgatctgcgcgagctggcctcg
gcctgttcgcagctgaccgccgatgtcgagggcacgatcgacgaggccgttgtcgcgcgc
tactacaccggccgcgccgaggcctcgagcttcaccgttgcggaccgcgccgtcgaaggc
agggccgccgaggcgctggaggcgctgcgctgggcgatggcgaccggcgtcgcccccgtc
atgatcaccagcgctctcgcccagggcgtccgggccatcggcaagctggcctccgccccc
cgcggtgcccgccccggcgacctcgcccgcgagctgggcatgccgccgtggaagatcgac
cgggtgcgccagcagatgcgcggctggtcggcggacggcgtcgccacggcgctgcgtgcg
gtggccgcggccgacgcgggcgtcaagggcggcggggacgaccccgggtacgccctggaa
aaggcggtcgtcgccatcgcccgcgcggcgcggtcccaccgctga
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