Streptomyces lydicus A02: T261_6182
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Entry
T261_6182 CDS
T03756
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sld
Streptomyces lydicus A02
Pathway
sld03030
DNA replication
sld03410
Base excision repair
sld03420
Nucleotide excision repair
sld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T261_6182
03410 Base excision repair
T261_6182
03420 Nucleotide excision repair
T261_6182
03440 Homologous recombination
T261_6182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sld03032
]
T261_6182
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_6182
Enzymes [BR:
sld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T261_6182
DNA replication proteins [BR:
sld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T261_6182
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
T261_6182
NER (nucleotide excision repair)
GGR (global genome repair) factors
T261_6182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
PDDEXK_5
Imm50
Motif
Other DBs
NCBI-ProteinID:
AJT67797
LinkDB
All DBs
Position
6612542..6615280
Genome browser
AA seq
912 aa
AA seq
DB search
MAAKAAKKSETTGTEAAAGGRPRLLLMDGHSMAYRAFFALPVENFTTATGQPTNAIYGFA
SMLANTLRDEAPTHFAVAFDVSRKTWRSAEFPDYKANRSKTPDEFKGQVELIGELLDAMH
VKRFAVEGFEADDVIATLTHQAVAQGFEVSIVTGDRDSFQLVSDDVTVLYPTKGVSELTR
FTPQKVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWINQFGSFAELVERAE
EVKGKAGANLREHLESVKLNRRLTEMVRDVELPCGPEALTREAYDREALKVFLNALEIRN
QGLRDRLHAVDPGEEEAAEEAAPAGGVEVDGTVLAAGELAPWLAEHGTGPLGVATVDVWT
LGSGSVAEVALATPQGPAVWFDPSQLDEADERAFAAWSADPARPKVMHNAKGLMRVFGEH
GWLIEGVTMDTALAAYLVKPGRRSFALDALSIEYLGRDLAPAAAGDGQLAFGADEEAEAD
ALMVQARTVLDLGTAFGTRLEEVGAAELLHDVELPTSALLARMERAGIAADRGWLERMEQ
QFAGAVQQAVQEAHAAAGHEFNLGSPKQLQEVLFGELGLPKTKKTKTGYTTDADALAWLA
AQTENELPVVMLRHREQAKLRTTVEGLIKTVAADGRIHTTFNQTVAATGRLSSTDPNLQN
IPVRTDEGRAIRRGFVVGEGFESLLTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTV
ASQVFSVPKDQVDAEMRRKIKAMSYGLAYGLSAFGLSQQLGIQPDEARKLMDTYFERFGG
VRDYLRRVVEEARATGYTQTILGRRRYLPDLNSDNRQRREMAERMALNAPIQGTAADIVK
IAMLKVDAALRTAGLQSRLLLQVHDEIVVEVAPGERGKVEELVRREMAAAVELSAPLDVS
VGSGKDWESAAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcaaaggcagcgaagaagagcgaaacgaccggcaccgaggcggcggcgggcggc
cgtccccgcctgctcctgatggacgggcattccatggcgtaccgggcgttcttcgccctg
cccgtggagaatttcaccaccgccacggggcaaccgaccaatgcgatctacggcttcgcg
tcgatgctcgcgaacaccctgcgtgacgaggcgcccacgcatttcgcggtggccttcgac
gtctcgcgcaagacgtggcgctccgcggagttccccgactacaaggcgaaccgctccaag
acgcccgacgagttcaagggccaggtcgagctgatcggcgagctgctcgacgccatgcac
gtcaagcggttcgcggtcgagggcttcgaggccgacgacgtgatcgccacgctcacccac
caggccgtcgcgcagggcttcgaggtctccatcgtcaccggtgaccgcgactccttccag
ctggtctccgacgacgtcacggtcctctaccccaccaagggcgtctccgagctgacccgc
ttcacccctcagaaggtcttcgagaagtacggcctgacccccgcccagtacccggacttc
gcggcgctgcgcggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaag
accgccacgaagtggatcaaccagttcggttcgttcgcggagctggtggagcgcgccgag
gaggtcaagggcaaggcgggcgccaatctccgcgagcacctggagtcggtcaagctcaac
cgccgcctgacggagatggtccgcgacgtcgagctgccctgcggcccggaggcgctgacc
cgcgaggcctacgaccgtgaggccctcaaggtgttcctcaacgccctggagatccgcaac
cagggcctgcgcgaccggctgcacgccgtcgacccgggcgaggaggaggccgccgaggag
gcagcgccggccggcggggtcgaggtggacggcacggtcctggccgcgggcgagctcgct
ccgtggctggccgagcacggcaccggcccgctcggcgtcgccaccgtggacgtatggacc
ctgggcagcggcagcgtcgccgaggtggcgctggccaccccccagggcccggccgtctgg
ttcgacccgtcgcagctggacgaggccgacgagcgggccttcgccgcctggagcgcggac
cccgcccgccccaaggtgatgcacaacgccaagggcctgatgcgggtcttcggcgagcac
ggctggctcatcgagggcgtcaccatggacaccgcgctggccgcctatctggtcaagccc
ggccgccgctcgttcgccctggacgccctctccatcgagtacctgggccgcgatctggcc
ccggccgccgccggggacggccagctggccttcggcgcggacgaggaagccgaggcggac
gccctgatggtccaggcccgcacggtcctcgacctgggcaccgcgttcgggaccaggctg
gaagaggtcggcgccgccgagctgctgcacgatgtcgagctgcccaccagcgccctgctg
gcccggatggagcgggccggtatcgccgccgaccggggctggctggagcgcatggagcag
cagttcgcgggcgccgtccagcaggccgtccaggaggcgcacgccgccgccggccacgaa
ttcaacctcggctcgcccaagcagctccaggaggtcctcttcggcgagctgggcctgccc
aagaccaagaagaccaagaccgggtacaccaccgacgccgacgcgctggcctggctggcc
gcgcagaccgagaacgaactcccggtggtcatgctccgccaccgtgagcaggccaagctg
cgcaccacggtcgagggcctgatcaagaccgtcgccgcggacggccgtatccacaccacc
ttcaaccagacggtggccgccaccggccggctgtcctccaccgaccccaacctccagaac
atcccggtgcgtacggacgagggccgggcgatccgccgcggcttcgtcgtcggcgagggc
ttcgaatccctgctgaccgccgactacagccagatcgagctgcgggtgatggcccatctc
tccgaggacgagggcctgatcgaggcgttcacctccggtgaggacctgcacaccaccgtc
gcctcccaggtcttctcggtccccaaagaccaggtcgacgcggaaatgcgccgcaagatc
aaggcgatgtcctacggcctggcgtacggcctgtcggccttcggcctctcccagcagctg
ggcatccagcccgacgaggcccgcaagctgatggacacctacttcgagcgcttcggcggc
gtacgcgactacctccgccgcgtcgtggaggaggcccgcgccaccggctacacccagacg
atcctcggccgccgccgctacctccccgacctcaacagcgacaaccgccagcgccgtgag
atggccgagcggatggcgctgaacgcaccgatccagggcaccgccgccgacatcgtcaag
atcgccatgctcaaggtcgacgcggccctgcgcacggccggccttcagtcccggctgctg
ctccaggtccatgacgaaatcgtggtcgaggtggcccccggcgagcgcggaaaggtcgag
gaactggtccggcgcgagatggcggcggcggtcgagctgagcgccccgctggatgtgtcg
gtcggctcgggcaaggactgggagtcggcggcgcactga
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