Streptomyces lydicus A02: T261_6739
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Entry
T261_6739 CDS
T03756
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sld
Streptomyces lydicus A02
Pathway
sld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T261_6739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sld03400
]
T261_6739
DNA repair and recombination proteins [BR:
sld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T261_6739
RecFOR pathway proteins
T261_6739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
ETF_alpha
IMS_HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AJT68341
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All DBs
Position
7242023..7242643
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AA seq
206 aa
AA seq
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MIAFVSGPVAALAPDSAVVEVGGIGMAVQCTPNTLSGLRVGEQTRIATSLVVREDSLTLY
GFADDDERQTFELLQTASGVGPRLAQAMLAVHSPDTLRLAVANGDEKTLTAVPGIGKKGA
QKLLLELKDRLGAPVGTSRAGVGAAVTSGWRDQLHAALIGLGYATREADEALDAVAPQAE
AALADGTQPQVPKLLKAALQTLNRAR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcttttgtctccggcccggtcgcggccctggctcccgactccgccgtcgtcgag
gtcggcggtatcggcatggccgtccagtgcacgcccaacaccctgtccgggctgcgggtg
ggggagcagaccaggatcgccacctcgctcgtcgtccgcgaggactcgctgacgctgtac
ggattcgccgacgacgacgagcgccagaccttcgagctgctgcagaccgccagcggcgtc
gggccccggctcgcccaggccatgctggccgtgcactccccggacacactgcggctggcg
gtcgccaacggggacgaaaagacgctgaccgccgtgccgggcatcggcaagaagggcgcg
cagaagctgctgctcgagctcaaggaccggctcggcgcgccggtgggcacgagccgggct
ggcgtcggcgccgccgtcacgtccggctggcgcgatcagctgcatgccgcgctgatcggc
ctcggctatgccacccgcgaggcggacgaggcgctggacgcggtcgccccgcaggccgag
gcggcgctcgccgacggcacccagccgcaggtgcccaagctgctcaaggccgccctgcag
accctgaaccgcgcgcgatga
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