Streptomyces lydicus A02: T261_7449
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Entry
T261_7449 CDS
T03756
Name
(GenBank) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sld
Streptomyces lydicus A02
Pathway
sld04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
T261_7449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sld03019
]
T261_7449
03009 Ribosome biogenesis [BR:
sld03009
]
T261_7449
04131 Membrane trafficking [BR:
sld04131
]
T261_7449
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sld04147
]
T261_7449
Messenger RNA biogenesis [BR:
sld03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
T261_7449
Ribosome biogenesis [BR:
sld03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
T261_7449
Membrane trafficking [BR:
sld04131
]
SNARE
SNARE associated proteins
Others
T261_7449
Autophagy
Aggrephagy
Other aggrephagy associated proteins
T261_7449
Exosome [BR:
sld04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
T261_7449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_16
Acetyltransf_10
NACHT
AAA_22
AAA_5
Acetyltransf_6
AAA_28
AAA_33
AAA_lid_3
AAA_14
ATPase_2
AAA_18
RuvB_N
nSTAND3
AAA_24
RNA_helicase
AAA_17
SKI
TsaE
AAA_19
Mg_chelatase
NPHP3_N
Sigma54_activ_2
ABC_tran
AAA_30
PanZ
Cytidylate_kin
AAA_11
IstB_IS21
ANAPC5
bpMoxR
TIP49
KTI12
Motif
Other DBs
NCBI-ProteinID:
AJT69047
LinkDB
All DBs
Position
8026785..8028080
Genome browser
AA seq
431 aa
AA seq
DB search
MAPMTPWRVRNLDEGDLDQVVRIWEESRDTGVDPAVSLAEVVSALGGDAPAVVAVVGDRV
VGAAVSSVAQERAWVLRLAIARQWRRHGIGSALLAALENRLADASVRRIGALLPAGEVGE
QAFKNSGYTERPGLSYFEKLLTSDSAEATMLDQLGGVVPEDGLWESIAGMTAEKALIERR
LVLPLENPAVAERYQLVPPRAVVLFGPPGTGKTTFARAVASRLRWPFIEVFPYQLGDDAY
GVAAALRRLFARVEHLEQAVLFFDEAEEIASERQDPTTLAHRVTNELLKLIPQFRRGERR
LLICATNAVRSLDPAFLRPGRFDYLIPVGPPDAEARRAIWTRYIGPDRVAGIELDALVEA
SDRFTPADIEYAARTAAQTAFERHLAADPQETVDPAQLTGDYLQAIAGTRTSLSEDDIRA
FNQDLRSAARV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccgatgactccgtggcgggtccgcaacctcgacgagggcgacctggaccaggtg
gtgcgcatctgggaggagtcgcgtgacaccggcgtcgatccggcggtgagcctcgcggag
gtggtgagcgccctcggcggggacgcgcccgccgtcgtggccgtggtgggggaccgggtc
gtcggtgcggcggtgtcctcggtggcacaggaacgggcctgggtgctgcggctggccatc
gcccgtcagtggcgccggcacggcatcggatcagcactgctggccgctctcgaaaaccgc
ctggcggacgcgagcgtacgccgtatcggggcgctgctgccggcgggggaggtcggcgag
caggccttcaagaactccggatacaccgagcggccgggcctgagctatttcgagaagctg
ctgacctcggattcggccgaggccaccatgctcgaccagctcggcggtgtggtgccggag
gacgggctgtgggagagcatcgccgggatgaccgcggagaaggcgctgatcgagcgccgg
ctggtgctgccgctggagaatcccgcggtcgcggagcgctatcagctggtgccgccgcgt
gccgtggtgctgttcgggccaccgggcaccggcaagaccacctttgcgcgggcggtggcc
tcccggctgcgctggccgttcatcgaggtgttcccgtaccagctcggcgatgacgcgtac
ggggtggcggccgccctgcgccggctgttcgcgcgcgtcgagcatctggagcaggccgtg
ctgttcttcgacgaggcggaggagatcgcctccgaacggcaggacccgaccacactggcc
catcgggtgaccaatgagctcctcaagctcatcccgcagttccggcgcggcgagcgcagg
ctgctgatctgcgcgaccaatgcggtgcgctccctggacccggcctttctgcggccggga
cggttcgactatctgatcccggtcggcccgccggacgccgaggcccgacgggccatctgg
acccgctacatcggaccggaccgggtggccggcatcgagctggacgcgctggtcgaggcc
agcgaccgcttcacccccgcggacatcgagtacgcggcacgcaccgccgcgcagaccgcc
ttcgaacgccacctggcggcggacccgcaggaaacggtcgacccggcacagctgaccggc
gactacctccaggccatcgccggtacccgcacctcgctcagcgaagacgacatccgcgcc
ttcaaccaggacctccggtccgctgcccgcgtctga
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