Streptomyces leeuwenhoekii: sle_13570
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Entry
sle_13570 CDS
T04414
Symbol
sle_13570
Name
(GenBank) Pectate trisaccharide-lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle00040
Pentose and glucuronate interconversions
sle01100
Metabolic pathways
sle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
sle_13570 (sle_13570)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sle_13570 (sle_13570)
Enzymes [BR:
sle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
sle_13570 (sle_13570)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
CQR60819
UniProt:
A0A0F7VM25
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All DBs
Position
chromosome:1684658..1685704
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AA seq
348 aa
AA seq
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MTGTPHTPRPPRLPRLPRISRRGLLAGTAASAASAVLPTAGAGRARAAAGPARLAAVAAQ
RADGFAGVSALGLTGTTGGAGAPVVTVTDADTFLDYCDRNEPYVIQVAGTLRITSKQGVR
SNKTIIGLGADAEITGGGLDLYRRHNVIIRNLRFTHAEDDAISIQQSSHHVWIDHCEFSS
GADGLIDIVRGADYVTVSWNHFHDHSKTMLIGHSDANGSQDRGTLRVTFHHNFFDGTDQR
HPRVRFAEPVHVYNNYFRNNRLYGVASTEDAGVLVEANYFENVAHPIYSGYDDSGPGRVV
ERGNVYVACGQPQTLGTVVEPRTYYAYSPDPASSLPSIVPAGVGVGRI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcaccccccacaccccccgtccccctcgcctcccccgcctcccccgcatctcg
cgccggggcctgctcgcgggcaccgcggcctccgcagcgtccgccgttctgccgaccgcc
ggcgccggtcgcgcccgggccgccgccggccccgcccggctcgccgccgtcgccgcgcag
cgcgccgacgggttcgccggcgtcagcgcgctcgggctcaccggtaccaccggcggcgcc
ggagccccggtcgtcacggtcaccgacgccgacaccttcctcgactactgcgaccgcaac
gagccctacgtcatccaggtcgccggcaccctgcgcatcaccagcaagcagggcgtccgt
tcgaacaagaccatcatcggtctgggcgccgacgcggagatcaccggcggcggcctggac
ctctaccgccgtcacaacgtcatcatccgcaacctgcgcttcacccacgccgaggacgac
gccatcagcatccagcagtcctcgcaccacgtctggatcgaccactgcgagttcagctcg
ggtgccgacggcctgatcgacatcgtgcgcggcgcggactacgtcaccgtgtcctggaac
cacttccacgaccacagcaagacgatgctgatcggccactcggacgccaacggcagccag
gaccgcggcaccctgcgggtcaccttccaccacaacttcttcgacggcaccgaccagcgc
caccccagggtgcggttcgccgagccggtacacgtctacaacaactacttccggaacaac
cggttgtacggcgtggcgtcgaccgaggacgcgggcgtgctcgtcgaggccaactacttc
gagaacgtcgcgcacccgatctactcgggctacgacgacagcggccccggccgggtcgtg
gagcgcggcaacgtgtacgtcgcctgcggacagccgcagacgctcggcacggtcgtggag
ccgcgcacgtactacgcctactcccccgaccccgcttcgagccttcccagcatcgtcccg
gccggcgtcggcgtcggcagaatctga
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