Streptomyces leeuwenhoekii: sle_13580
Help
Entry
sle_13580 CDS
T04414
Symbol
sle_13580
Name
(GenBank) Pectate trisaccharide-lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle00040
Pentose and glucuronate interconversions
sle01100
Metabolic pathways
sle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
sle_13580 (sle_13580)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sle_13580 (sle_13580)
Enzymes [BR:
sle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
sle_13580 (sle_13580)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Phage_cement
Motif
Other DBs
NCBI-ProteinID:
CQR60820
UniProt:
A0A0F7VMZ0
LinkDB
All DBs
Position
chromosome:1685718..1686731
Genome browser
AA seq
337 aa
AA seq
DB search
MTDTPHISRRGLLAGTAASAALLAAGAGQAQAAADPARLAAVAAQSADGFAGVSALGLTG
TTGGVAGPTVTVTTAAQLRDYAGRNSPYVLLVSGRIAFDGMITVVADKSILGVGSTAEIT
GGGLQLGSTTRPGNNVVIRNIRFTDASDDSISVTNRAHHVWIDHCDFSQGYDGLLDIKRE
SDYVTVSWNHFHDHSKACLLGHNDSYTADRGKLRVTYHHNFFDGTDQRHPRVRFAEPVHV
YNNLYRNNRLYGVASTEDAGVLVEANYFENVAHPIYSGYDDSGPGRVVERGNVYVACGQP
QTLGTVVEPRTYYAYSPDPASSLPSIVPAGVGVGVIA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccccccacatctcccgccggggcctgctcgcgggcaccgcggcctccgcc
gctctgctggccgccggggccggtcaggcccaggcggccgccgatcccgcccggctcgcc
gccgtcgccgcgcagagcgccgacgggttcgccggcgtcagcgcgctcgggctgaccggc
accaccggcggcgtcgccggtcccacggtcaccgtcacgaccgccgcccagctccgcgac
tacgccggccggaactccccgtacgtgctgctggtctccggccgcatcgcgttcgacggc
atgatcaccgtggtggccgacaagtccatcctcggcgtcggctcgacggcggaaatcacc
ggcggtggactccagttgggctcgaccacccggcccggcaacaacgtcgtcatccgcaac
atccggttcaccgacgcctcggacgactcgatcagcgtcaccaaccgggcccaccacgtc
tggatcgaccactgcgacttctcgcagggctacgacgggctgctcgacatcaagcgggag
tcggactacgtcaccgtctcctggaaccacttccacgaccacagcaaggcctgcctgctc
ggccacaacgacagttacaccgccgaccgcggcaagctccgggtgacgtaccaccacaac
ttcttcgacggcaccgaccagcgccaccccagggtgcggttcgccgagccggtacacgtc
tacaacaacctctaccggaacaaccggttgtacggcgtggcgtcgaccgaggacgcgggc
gtgctcgtcgaggccaactacttcgagaacgtcgcgcacccgatctactcgggctacgac
gacagcggccccggccgggtcgtggagcgcggcaacgtgtacgtcgcctgcggacagccg
cagacgctcggcacggtcgtggagccgcgcacgtactacgcctactcccccgaccccgct
tcgagccttcccagcatcgtcccggccggcgtcggcgtcggcgtcatcgcctga
DBGET
integrated database retrieval system
