Streptomyces leeuwenhoekii: sle_18570
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Entry
sle_18570 CDS
T04414
Symbol
sle_18570
Name
(GenBank) Probable ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sle_18570 (sle_18570)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sle03019
]
sle_18570 (sle_18570)
03400 DNA repair and recombination proteins [BR:
sle03400
]
sle_18570 (sle_18570)
Enzymes [BR:
sle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
sle_18570 (sle_18570)
Messenger RNA biogenesis [BR:
sle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
sle_18570 (sle_18570)
DNA repair and recombination proteins [BR:
sle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
sle_18570 (sle_18570)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
CQR61319
UniProt:
A0A0F7VMX8
LinkDB
All DBs
Position
chromosome:2279388..2281562
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AA seq
724 aa
AA seq
DB search
MEGMEHTSNADLRTAADAVLARLVGDPSGAARLREDQWRAIEALVADRRRALVVQRTGWG
KSAVYFVATALLRARGGGPTVIVSPLLALMRNQVEAAARAGIHARTINSSNTEEWDTVQS
EIAAGEVDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLR
TMLADLPPGVPVLATTATANARVTADVAEQLGTGGTSDALVLRGPLDRESLSLNVLRLPD
AAHRLAWLADHLHDLPGSGIVYTLTVAAAEEVTAFLRQRGHTVASYTGKTENADRQQAED
DLLANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLP
GREDEAIWEYFASLAFPPEELVRRTLDVLARAEGPMSLPALEPLVDLRRSRLEAMLKVLD
VDGAVKRVKGGWIATGQPWTYDAERYDWVARQRKAEQQAMREYASTTGCRMEFLQRQLDD
TAARPCGRCDNCAGPRFTANTSAEALDAARGDLGRAGVEVEPRRMWPTGLPAVGVDLKGR
IPAGEQAAPGRALGRLSDIGWGNRLRPMLAPQAPDGPVPDDVAKAVVHVLADWARGPGGW
ASGAADAPPRPVGVVTVASRTRPHLVGSLGAHIAEVGRLPLLGRVEYTADAPRVSRSNSA
QRLKALTGALTVPPGLAAALADLRGPVLLVDDFTETGWTLAVAARMLRQAGAQGVLPLVL
AVQA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatggagcacacgagcaacgcggacctccgcaccgccgccgacgccgtcctc
gcccgcctcgtcggggatccctcgggcgctgcccggctgcgcgaggaccagtggcgggcg
atcgaggcgctggtcgccgaccggcgccgggccctggtcgtgcagcgcacgggctggggg
aagtccgcggtctacttcgtggcgacggccctgctgcgagcccggggcggcggccccacc
gtgatcgtctccccgctgctggcgctgatgcgcaaccaggtggaggccgcggcccgcgcc
ggcatccacgcgcggaccatcaactcctccaacaccgaggagtgggacacggtgcagagc
gagatcgcggcgggcgaggtcgatgtcctcctggtgagcccggagcggctgaacaacccg
gacttccgcgaccaggtgctgcccaagctggccgccgcgaccggactgctggtggtggac
gaggcgcactgcatctccgactggggccacgacttccgcccggactaccggcggctgcgc
acgatgctcgccgacctgccgccaggggtgccggtgctcgcgaccaccgccaccgccaac
gcccgcgtcacggccgacgtcgccgagcagctcggcaccgggggcacctcggacgcgttg
gtgctgcgcggcccgctggaccgggagagcctcagcctgaacgtgctgcggctgccggac
gcagcgcaccggctcgcctggctcgccgaccacctgcacgaccttccgggctccgggatc
gtctacacgctcaccgtggccgccgccgaggaggtcacggccttcctgcggcagcgcggt
cacaccgtggcctcctacaccggcaagacggagaacgccgaccggcagcaggccgaggac
gatctgctcgccaaccgggtcaaggccctggtcgccacctccgccctcggcatgggattc
gacaagcccgatctcgggttcgtcgtgcacctcggatcgccctcctcccccatcgcctac
taccagcaggttgggcgcgcggggcgcggtgtcgagcacgccgaggtgctcctcctcccc
ggccgggaggacgaggcgatctgggagtacttcgcctccctggccttcccgccggaggag
ctggtgcgccgcacgctggatgtcctcgcgcgcgcggagggccccatgtcgctgcccgcc
ctggagcccttggtggacctgcgccgctcccgtctggaagccatgctcaaggtgctcgat
gtggacggggcggtcaagcgcgtcaagggcggctggatcgcgaccggacagccgtggacc
tacgacgccgagcggtacgactgggtcgcgcggcagcggaaagcggaacagcaggcgatg
cgcgagtacgcgtccacgacgggctgccgcatggagttcctgcaacgtcagctcgacgac
acggccgccaggccctgcggtcgctgcgacaactgcgccggtccgcggttcaccgcgaac
acctccgccgaggcgctggacgccgcccgcggcgacctgggccgggccggtgtcgaggtg
gagccccggcgcatgtggccgaccgggctccccgccgtcggtgtcgacctcaaggggcgc
atccccgccggtgaacaggccgcgccgggccgggctctgggacggctgtccgacatcggc
tggggcaaccggctgcggccgatgctggctccccaggcgccggacgggccggtgcccgac
gacgtggcgaaggccgtcgtgcacgtcctggccgactgggccagggggcccggcggctgg
gcctccggcgcggcggacgcgcccccgcgtcccgtcggggtggtgaccgtggcctcgcgc
acccggccgcacctggtcggctctctcggagcgcacatcgccgaggtcggccgcctgccg
ctgctgggccgcgtcgagtacacggcggacgcgccccgcgtgtcccgcagcaacagcgcc
cagcgactcaaggccctcaccggagcgctgacggtgccgcccgggctcgccgccgccctc
gccgatctgcgggggccggttctcctcgtggacgacttcaccgagaccggctggaccctc
gccgtggcggcccggatgctccgccaggccggcgcacaaggggtgctgcccctggtcctc
gccgtgcaggcgtga
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