Streptomyces leeuwenhoekii: sle_19240
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Entry
sle_19240 CDS
T04414
Symbol
sle_19240
Name
(GenBank) Putative ribonuclease J Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sle_19240 (sle_19240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sle03019
]
sle_19240 (sle_19240)
Messenger RNA biogenesis [BR:
sle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
sle_19240 (sle_19240)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CQR61385
UniProt:
A0A0F7VNU8
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Position
chromosome:complement(2370254..2371939)
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AA seq
561 aa
AA seq
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MSHPHPELGPPPPLAEGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFSSIRDRLDDIEGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLQVAEGNRERVGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDNRLTDLHAFARLSEEGIDLLLTDSTNAEVPGFTPHERDISGVLRQVFAGARKRIIVAS
FASHVHRIQQILDAAYEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKALDDLPD
HEVVLVCTGSQGEPMAALSRMANRDHQIRIVEGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICRPRNLMPVHGEWRHLRANAELGAMTGVPHD
RIVIAEDGVAVDLVEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFV
VIDASTGKITGGPHIQARGSGIDDSAFGDVIPRITDVLERSAQDGVVEPHQMQQLVRRTL
GKWVSDTYRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcatccgcatcctgaactgggcccgcccccgccgcttgccgaaggcggcctgcgg
gtcaccccgctcggcggcctcggcgaaatcggccggaacatgacggtgttcgagtacggc
ggccgcctgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gatctgatcctgccggacttctcgtccatccgggaccgcctcgacgacatcgagggcatc
gtcctcacccatggccacgaggaccacatcggcggcgtcccctacctcctgcgcgagaag
ccggacatcccgctgatcggctccaagctgaccctcgccctgatcgaggccaagctccag
gagcaccgcatccgcccgtacaccctgcaggtggcggaagggaaccgcgagcgcgtcggc
ccgttcgactgcgagttcatcgcggtcaaccactccatccccgacgcactggccgtggcc
atccgcacccccgcgggcatggtggtccacaccggcgacttcaagatggaccagctcccg
ctggacaaccgcctcaccgacctccacgcgttcgcgcggctgagcgaggagggcatcgac
ctcctcctcaccgactccacgaacgcagaggtccccggcttcaccccgcacgagcgggac
atctccggcgtcctgcgccaggtgttcgccggcgcccgcaagcggatcatcgtggccagc
ttcgccagccacgtccaccgcatccagcagatcctggacgcggcgtacgagtacggccgc
cgcgtcgccttcgtcggccgctccatggtccggaacatgggcatcgcccgtgacctgggc
tacctgaaggtccccccgggcctggtcgtcgacgtcaaggccctcgacgacctcccggac
cacgaggtggtcctggtctgtacggggtcccagggcgagccgatggcggccctgtcccgc
atggccaaccgggaccaccagatccgcatcgtcgagggcgacacggtgatcctggcgtcc
tcgctcatccccggcaacgagaacgcggtctaccgcgtgatcaacggcctgacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgccgtccgaggaacctgatgccggtccatggc
gaatggcgccacctgcgcgccaacgcggaattgggtgccatgaccggcgtcccgcacgac
cgcatcgtcatcgccgaggacggcgtggccgtcgacctggtcgagggcaaggcgaagatc
tccggcaaggtgcaggccggctacgtgtacgtcgacggcctctcggtcggcgacgtgggc
gagccggcccttaaggaccgcaagatcctcggtgacgagggcatcatctcggtcttcgtg
gtcatcgacgcctccaccggcaagatcacgggtggtccgcacatccaggcccgcggctcg
ggcatcgatgactccgccttcggcgacgtgatcccccggatcacggacgtcctggagcgc
tccgcccaggacggcgtcgtcgagccgcaccagatgcagcagttggtccgccggaccctg
ggcaagtgggtctccgacacctaccggcgcaggccgatgatcctccctgtcgtcgtggag
gtctga
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