Streptomyces leeuwenhoekii: sle_20800
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Entry
sle_20800 CDS
T04414
Symbol
sle_20800
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
sle_20800 (sle_20800)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sle03400
]
sle_20800 (sle_20800)
Enzymes [BR:
sle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
sle_20800 (sle_20800)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
sle_20800 (sle_20800)
DNA repair and recombination proteins [BR:
sle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
sle_20800 (sle_20800)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Auto_anti-p27
DUF7573
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CQR61541
UniProt:
A0A0F7VXB3
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All DBs
Position
chromosome:complement(2562207..2563067)
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAHRAVADAEVLHPRAIRRHVAGAGDFAHRLKGHRIGTPSRRG
KYLWLPLEDTGQAVLAHLGMSGQLLVQPHSAPDEKHLRIRIRFDDGLGTELRFVDQRTFG
GLSLHDTTPDGLPDVIGHIARDPLDPLFDDEAFHQALRRKRTTIKRALLDQSLISGVGNI
YADEALWRSRLHYERPTTGFTRPRTLQLLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCATPMRRRPWMNRSSYYCPACQRAPRVRP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggtcgtccggcgcggcctggaacggtgggtcgcccac
cgtgccgtcgccgacgccgaggtactgcacccgcgcgcgatacgccgccacgtcgccggg
gccggcgacttcgcccaccgcctcaagggccaccgcatcggcacacccagccgtcgcggc
aagtacctgtggctgcccctggaggacaccggccaggcggtcctcgcccacctcggcatg
agcggccagctcctggtccagccgcactcggcaccggacgagaagcacctgcgcatccgg
atccgcttcgacgacggcctgggaaccgagctgcgcttcgtcgaccagcgaactttcggc
ggcctgtcgctgcacgacaccacccccgacggactgccggacgtcatcgggcacatcgcg
cgcgacccgctggacccgctcttcgacgacgaggcgttccaccaggcgctgcgccgcaag
cgcaccaccatcaaacgggccctgctcgaccagtccctgatcagcggcgtcggcaacatc
tacgccgacgaggccctgtggcgttcccgcctccactacgagcgcccgacgaccggcttc
acccgcccccgtacgctccagctcctcggccacgtcagggacgtcatgaacgcggccctc
gccgtgggcggcaccagcttcgacagcctgtacgtcaacgtcaacggcgagtccggctac
ttcgaccggtcgctcgacgcctacggccgcgagggcctgccgtgccgccgctgcgccacc
ccgatgcgccggcgcccctggatgaaccgctccagctactactgtcccgcctgccagcgg
gctccccgcgtccggccgtga
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