Streptomyces leeuwenhoekii: sle_24960
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Entry
sle_24960 CDS
T04414
Symbol
sle_24960
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sle
Streptomyces leeuwenhoekii
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sle03021
]
sle_24960 (sle_24960)
Transcription machinery [BR:
sle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sle_24960 (sle_24960)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
NirdL-like_HTH
MarR_2
MarR
IF2_N
Sigma70_ECF
HTH_3
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
CQR61957
UniProt:
A0A0F7VWN2
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All DBs
Position
chromosome:3033479..3034606
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AA seq
375 aa
AA seq
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MRNGDGPVRDEERGTRELPAEGTRSPNGAPRTASGIDGIPEQARPHPEDAPAGAGLPADG
QRPADEDGAVRSAPADGRIGGTPVRPVRARARARERATGGTMSEHERHSEDEAPAARGAQ
GTHDPQDRSGARALFAELRTLEKDSPEYAELRNRLVRMHLPLVEHLARRFRNRGEPLDDL
TQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLT
TATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADT
LGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLL
ARTLAQLREKLLVEE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggacgggccggtgcgggacgaagagcgcggcacacgggagctgccggcc
gagggcacacgttctccgaacggggccccgcgcacggcgagcggcatcgacggcatcccc
gagcaggcccggccgcatccggaggacgcccccgcgggggccggcctcccggcggacgga
cagcggcccgcggacgaggacggtgccgtgcggagcgcgcctgcggacgggcggatcggg
ggcacccccgtccggccggtccgcgctcgggcgcgggctcgggaaagggcgacgggcggg
acgatgagcgagcacgagcgacactccgaggacgaggcaccggccgcgcgcggcgcgcag
ggtacgcacgacccgcaggaccgcagcggggcgcgcgccctcttcgccgagctgcgcacg
ctggagaaggacagccccgagtacgcggagctgcgcaaccggctggtccggatgcacctg
ccgctcgtcgagcacctcgcgcgccgcttccgcaaccgcggggagccgctggacgacctg
acccaggtcgccaccatcgggctgatcaagtccgtcgaccgcttcgacccggaccgcggg
gtggagttctcgacgtacgcgacaccgacggtggtcggcgagatcaagcggcacttccgc
gacaagggctgggcggtgcgggtgccgcgccggctccaggagctgcgcctgtccctgacg
acggccacggcggagctctcgcaactgcacggccgctcccccacggtccacgagctcgcg
gagaagctggcgatctcggaggaggaggtcctggagggcctggagtccgcgaacgcgtac
tccacgctgtccctggacgtgcccgacaccgacgacgagtccccggcggtcgccgacacc
ctcggcgccgaggacgaggcgctggagggcgtggagtaccgggaatcgctcaaaccgctg
ctggaggatctgccgccgcgcgagaagcggatcctgctgctgcgcttcttcggcaacatg
acccagtcgcagatcgcgcaggaggtcgggatctcccagatgcacgtctcccggctgctg
gcgcgcaccctggcgcagctacgggagaagctcctcgtggaggagtag
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