Streptomyces leeuwenhoekii: sle_25580
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Entry
sle_25580 CDS
T04414
Symbol
sle_25580
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle03420
Nucleotide excision repair
sle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
sle_25580 (sle_25580)
03430 Mismatch repair
sle_25580 (sle_25580)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sle03400
]
sle_25580 (sle_25580)
Enzymes [BR:
sle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
sle_25580 (sle_25580)
DNA repair and recombination proteins [BR:
sle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
sle_25580 (sle_25580)
MMR (mismatch excision repair)
Other MMR factors
sle_25580 (sle_25580)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CQR62019
UniProt:
A0A0F7VP88
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All DBs
Position
chromosome:complement(3100906..3104814)
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AA seq
1302 aa
AA seq
DB search
MTFAGAASAGVTDRTTPCHLRFCRAGRPMGPALSVAAASLCEMPARITDPEQLKELLGIP
FTPEQTDCITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQVAPEQVLGLTFTNKAAGE
LAERVRKALVKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLLTDHGLRIGLEPSSRLLAD
ATRYQLAARVLREAPGPYPALTRSFPDLVGDLLALDAELSEHLVRPEDLRAWDAELLRSL
DGAKLTNADLRKVPEAAAARRELADLVIRYRAAKRERDLLDFGDQIALSARLAALPDVGR
ILRDEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGDPCQAIYGWRGASVANLDD
FPEHFPHADGSPASRRALSENRRSGGRLLDLANGLAEPLRALHAGVEALRPAPGAERDGT
VRCALLRTHAEEIDWIAGSIAHLVRTGTAPGEIAVLCRTATDFAEIQGALVAREVPVEVV
GLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIGPRDLALLGRRARLLVSHA
RVDGDDDPDRRLAQAVEGVDPAEVTSLADALDTFLETPLDGTGDDDGLPFSPEARVRFAR
LAAELRDLRRSLSDPLMDVLHRVLAVTGLEVELSASPQALAARRRETLSNFLDVAASFAA
GDNEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGT
FPSAQGREKWTAQGKVLPHGLRGDADTLPDVPSWDSKGIRAFHEAMKDHQHTEELRLGYV
TFTRPRSLLLGSGHWWGPTQKKPRGPSAFLQALYEHCAAGHGEIEVWADEPAEGEENPAL
HRASADRAWPLPLDEASLARRRAAAETVLAHLDELAAHPAAVPGADSHDHPDWPPPEEDE
PPFDDEGLHDEVFHDAAPYDGEAPYDDECPYGGHGDRAEGHPPADENPFLREDPFAEEFA
AGGLEAPAEEDPFVRDAEDAWTDGAWTGDALSPEDGHALRDGRAPGEDPALRGPRATARP
VVPHQATAPEQPGGADAPRPHPAHPEPGPARRRAPEPPGLTPEEARTVASWDRDLDALAG
ELLRARRSVTEVPLPASLTASQLLRLAEDPDGFAQELARPMPRPPQPAARRGTRFHAWVE
ARFEELTLPLPDLEELPDRDAEIADERDLEALKEAFERTEYARRTPYRVEAPFQLSLAGR
VVRGRIDAVYKEGDGPDTTYEIVDWKTSRAPTGDPLQLAVYRLAWAEQQGVPLESVTAAF
LYVRTGDVVRPEGLPDRPALERLLLGDPHGDEPHGRTAGAGR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttcgccggtgcggcgtccgccggtgtgaccgaccgcaccaccccttgccacctg
cgcttctgccgggcggggcggccgatggggccggcgctgtcggtggccgccgctagcctc
tgtgagatgcccgctcgtatcaccgatcccgagcagctcaaagagctcctcggcattccg
ttcaccccggagcagacggactgcatcaccgcgccgcccgccccgcaggtgatcgtggcc
ggagccggctccggcaagaccacggtgatggcggcgcgcgtggtgtggctggtcggcacc
ggccaggtcgcgcccgagcaggtgctcggcctcaccttcaccaacaaggccgccggcgag
ctcgccgaacgcgtccgcaaggcgctggtcaaggccggcgtcaccgaccccgacgtcatc
gacccggacaacccgccgggcgagccggtgatctccacctaccacgccttcgcgggccgc
ctcctgaccgaccacggcctgcgcatcgggctggaaccgtcctcccgcctgctcgccgac
gccacccgctaccagctcgccgcacgggtgctgcgcgaggcccccggtccctaccccgca
ctgacccgctccttccccgacctggtcggcgacctcctcgcgctcgacgccgagctgtcc
gagcacctggtacggccggaggacctgcgcgcctgggacgccgaactgctgcgttctctc
gacggcgccaagctcaccaacgccgacctgcgcaaggtccccgaggccgccgccgcccgc
cgcgaactggccgacctggtgatccgctaccgggcggccaagcgggagcgcgatctgctc
gacttcggcgaccagatcgccctgtcggcgcggctggccgccctgcccgacgtggggcgc
atcctgcgcgacgagttccgcgtcgtcctcctcgacgagtaccaggacacctcggtcgcc
cagcgcgtcctcctcgcgggcctcttcggcggcggcaccggccacccggtgaccgccgtc
ggcgacccctgccaggccatctacggctggcgcggcgcctccgtcgccaacctcgacgac
ttccccgagcacttcccgcacgccgacggcagccccgcgtcccgccgggcgctcagcgag
aaccgccgcagcggcggacgcctcctcgacctcgccaacggcctggccgaaccgctgcgc
gccctgcacgcgggagtggaggccctccgcccggcccccggcgccgaacgcgacggcacg
gtgcgctgcgccctgctgcgcacccacgccgaggagatcgactggatcgccggctccatc
gcccacctcgtacggaccgggacggcgcccggcgagatcgccgtcctgtgccgcaccgcg
accgacttcgcggagatccagggcgccctcgtggcccgggaggtgcccgtggaggtggtg
ggcctgtccggcctgctgcacctgcccgaggtggccgatctggtcgccgtctgcgaggtc
ctccaggatcccggcgccaacgcctccctcgtccgcctgctcaccggcccgcgctggcgc
atcggcccgcgcgacctcgccctgctgggccgccgcgcccggctgctcgtctcccacgcg
cgcgtggacggcgacgacgaccccgaccgccggctcgcccaggccgtcgagggcgtcgac
ccggcggaggtgacatcgctcgccgacgccctcgacaccttcctggagaccccgctggac
ggcacgggggacgacgacgggctgccgttctccccggaggcgcgcgtgcggttcgcccgc
ctcgccgccgaactgcgcgacctgcgccgctccctgtccgacccgctgatggacgtcctg
caccgggtcctcgccgtcaccggtctggaggtcgagctgtcggcgtccccgcaggccctg
gccgcccgccgccgggagaccctgtcgaacttcctggacgtcgccgcctccttcgccgcc
ggcgacaacgaggccaccctgctcgccttcctgggcttcctgcgcaccgccgcccagtac
gagaagggcctcgacaacgccctccccggcggcgagaacaccgtcaaggtgctcaccgcc
cacaagtccaagggcctggagtgggacgtcgtcgccgtccccggcctggtcaccggcacc
ttccccagcgcgcaggggcgcgagaagtggacggcccagggcaaggtgctgccgcacggc
ctgcgcggcgacgccgacaccctgcccgacgtcccctcctgggactccaaggggatcagg
gccttccacgaggcgatgaaggaccaccagcacaccgaggagctgcgcctgggctacgtc
accttcacgcgcccccgctccctcctcctgggctccggccactggtggggcccgacacag
aagaagccccgcggaccctccgccttcctccaggccctgtacgagcactgcgccgccggc
cacggcgagatcgaggtctgggcggacgagcccgccgagggggaggagaaccccgccctg
caccgggcgagcgccgaccgggcatggccgctgcccctcgacgaggcgtccctcgcccgg
cgcagggccgccgcggagacggtcctggcccacctggacgagctcgccgcccatccggcc
gccgtacccggcgcggacagccacgaccacccggactggcccccgccggaggaggacgag
ccccccttcgacgacgagggcctccacgacgaggttttccacgacgcggctccgtacgac
ggtgaagccccgtacgacgacgagtgtccgtacgggggacacggcgaccgggcggagggg
catccccccgccgacgaaaaccccttcctccgggaggaccccttcgccgaggagttcgcc
gccgggggccttgaggcgcccgccgaggaggaccccttcgtccgggacgccgaggacgcc
tggaccgacggcgcctggaccggggacgccctctccccggaggacggccacgccctccgg
gacggccgggcccccggggaggacccggccctccggggcccccgggccaccgcccgcccg
gtcgtcccgcaccaggccacggctcccgaacagcccggcggcgcagacgctccgcgcccg
caccccgcgcacccggagccggggcctgcccgtcgccgggcgccggagccgcccgggctc
accccggaggaggcccgcaccgtcgcgtcctgggaccgcgacctcgacgcccttgccggc
gagctcctgcgggcccgccggagcgtcaccgaggtgcccctgccggcgtcgctgaccgcg
tcgcagctcctgcggctggccgaggaccccgacggcttcgcccaggagctggcccgcccc
atgccgcgcccgccccagcccgccgcccgccgcggcacccgcttccacgcctgggtcgag
gcccgcttcgaggagctgacactgcccctgcccgacctggaggagctgcccgaccgcgat
gccgagatcgccgacgaacgcgacctggaggcactcaaggaagcgttcgagcgcacggag
tacgcccgccgcacgccctaccgcgtcgaggcccccttccagctctcgctggccgggcgg
gtcgtacggggccgcatcgacgccgtctacaaggagggcgacggtccggacacgacgtac
gagatcgtcgactggaagaccagccgggcccccaccggcgacccgctccagctcgcggtg
taccggctggcctgggccgagcagcagggggtgcccctggagtcggtgacggccgcgttc
ctgtacgtgcgcaccggtgacgtcgtgcgtcccgaggggctgccggaccgccccgcgctg
gaacggctgctgctgggcgatccgcacggtgacgaaccgcacggccggaccgccggtgcg
ggccgatag
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