Streptomyces leeuwenhoekii: sle_29080
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Entry
sle_29080 CDS
T04414
Symbol
sle_29080
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sle_29080 (sle_29080)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sle03019
]
sle_29080 (sle_29080)
03110 Chaperones and folding catalysts [BR:
sle03110
]
sle_29080 (sle_29080)
03029 Mitochondrial biogenesis [BR:
sle03029
]
sle_29080 (sle_29080)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sle04147
]
sle_29080 (sle_29080)
Enzymes [BR:
sle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
sle_29080 (sle_29080)
Messenger RNA biogenesis [BR:
sle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
sle_29080 (sle_29080)
Chaperones and folding catalysts [BR:
sle03110
]
Heat shock proteins
HSP60 / Chaperonin
sle_29080 (sle_29080)
Mitochondrial biogenesis [BR:
sle03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
sle_29080 (sle_29080)
Exosome [BR:
sle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
sle_29080 (sle_29080)
Exosomal proteins of other body fluids (saliva and urine)
sle_29080 (sle_29080)
Exosomal proteins of breast cancer cells
sle_29080 (sle_29080)
Exosomal proteins of colorectal cancer cells
sle_29080 (sle_29080)
Exosomal proteins of bladder cancer cells
sle_29080 (sle_29080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CQR62369
UniProt:
A0A0F7VPW5
LinkDB
All DBs
Position
chromosome:complement(3506873..3508501)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPAALKKGID
AAVAAVSEDLLATARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILINQGKISAIADLLPLLEKVIQ
ANSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
ISEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVDGAGKSEDVQGRVAQIKAEIETTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKERKHRLEDAISATRAAVEEGIVSGGGSALV
HASKVLEGNLDKTGDEATGVSVVARAVVEPLRWIAENAGLEGYVIVSKVKELEKGSGYNA
ATGEYGDLIKQGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEAAAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcgcagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccacggtcctggcccaggcgctggtccgc
gagggcctgaagaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gcggccgtcgccgccgtctccgaggacctcctcgccacggcccgcccgatcgacgagaag
tccgacatcgccgcggtcgccgcgctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctggaggacccctacatcctcatc
aaccagggcaagatctccgccatcgcggacctgctgccgctgctggagaaggtcatccag
gccaactcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcc
accctcgtcgtgaacaagatccgcggcaccttcaacgccgtcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggcgatgctccaggacatggcggtcctcaccggcgcgaccgtc
atctccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctcggctccgcc
cgccgcgtcaccgtcaccaaggacgacaccacgatcgtcgacggcgccggcaagtccgag
gacgtgcagggccgcgtcgcgcagatcaaggccgagatcgagaccaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagcgcaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtc
cacgcctccaaggtcctggagggcaacctcgacaagaccggcgacgaggccaccggtgtc
tccgtcgtcgcgcgcgccgtcgtcgagccgctgcgctggatcgcggagaacgcgggcctg
gagggctacgtcatcgtctccaaggtcaaggagctggagaagggcagcggctacaacgcc
gccaccggcgagtacggcgacctgatcaagcagggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgctgctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaagaggccgccgcgggccacggccacggccacggccac
tcccactga
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