Streptomyces leeuwenhoekii: sle_29840
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Entry
sle_29840 CDS
T04414
Symbol
sle_29840
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sle_29840 (sle_29840)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sle03021
]
sle_29840 (sle_29840)
03400 DNA repair and recombination proteins [BR:
sle03400
]
sle_29840 (sle_29840)
Enzymes [BR:
sle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sle_29840 (sle_29840)
Transcription machinery [BR:
sle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
sle_29840 (sle_29840)
DNA repair and recombination proteins [BR:
sle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
sle_29840 (sle_29840)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
CQR62445
UniProt:
A0A0F7VRP8
LinkDB
All DBs
Position
chromosome:complement(3577583..3581068)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEFEIDKRDMVGVRVDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGTDTPLDAGILTVEDIIATIKYLVKLHAGETETVGDSGRSIMVETDDIDHFG
NRRIRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFIETPYRKVVDGQVTDEVDYLTADEEDRFVIAQANAPLTDEMRF
AEARVLVRRKGGEVDYVGPEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIVNEGDRIIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQSIGADKVEPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttctcgcgctt
cagaccgagagcttcgactggctgctcggcaatgacgcgtggaaggctcgcgtcgaggag
gctctcgagaacggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgcttc
gagccgccgaagaactcgatcgacgagtgcaaggagcgcgacttcacgtacgcggccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagaccgtc
ttcatgggcgacttcccgctcatgacgaacaagggcacgttcgtcatcaacggcaccgag
cgtgtcgtggtgtcccagctggtccgttcgccgggcgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagttcgagatcgacaagcgcgacatggtcggcgtccgtgtcgaccgcaagcgcaagcag
tccgtgaccgtcctgctcaaggcgctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgctgctggagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctgggtacggacaccccgctggacgcgggcatcctgacc
gtcgaggacatcatcgcgacgatcaagtacctggtgaagctgcacgccggtgagaccgag
acggtcggcgactccggtcgctccatcatggtcgagaccgacgacatcgaccacttcggc
aaccgtcgcatccgcagcgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccactcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgtcgt
ctgaacgccctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgcgac
gtgcacccgtcgcactacggccgtatgtgcccgatcgagacgccggaaggcccgaacatc
ggcctgatcggctcgctggcctcctacggccgggtcaacgcgttcggtttcatcgagacg
ccgtaccgcaaggtcgtcgacggccaggtcaccgacgaggtggactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctcaccgacgagatgcgcttc
gccgaggcccgcgtgctggtccgccgcaagggcggcgaggtcgactacgtcggccccgag
gacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgacggccatgatc
cccttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgccag
gccgtgccgctgattaagtccgaggcgccgctcgtcggcaccggcatggagtaccgctcc
gcggtcgacgccggcgacgtggtcaaggccgagaaggccggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cggatcatcgagggccaggtcctcgccgacggtccggccaccgagaacggtgagatggcc
ctcggcaagaacctgctggtcgcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccggatcggcgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acgccggaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggtgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgagctgcccccgggcgtgaaccagctcgtccgcgtctacgtggcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggtgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctcggtgtgccgtcccgaatgaacccgggacaggtgctcgagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgccgacgagtgggcg
cagcgcctgcagtccatcggcgccgacaaggtcgagcccggcaccaacgtcgccaccccg
gtcttcgacggtgcgcgtgaggacgagctcgcgggtctgctccagcacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgaccggcaaggcgcggctgttcgacggccgtagc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcggttcggcgagatggaggtgtgggca
ctcgaggcgtacggcgcggcctacgcgctccaggagctgctgaccatcaagtccgacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgaaccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtcgctctgcctgaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgcagcggaggagctcggtatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
